Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHSRPQISPERAAQLAAEWFEGQLDAPAELDSYADRNFLVRAPDGTKAVLKVPNVELAEDIDLQIAILKWLEARPSAPLVPRVLGPTRTIEDDAGRPTRAWMVGWIEGELWFDASPTPALREELGAALGQLARDLEDFRHPGMERHFAWNLAEANWIAEELHRFEDPARAELVCDALMQFQGRVLPRLAELPTQVIHGDANDKNLAVAEGRLVGVFDFGDACWCPAVCDLAIALAYAAMDLRLGCALPEVAAACAQVCAGYHGRRPLTALELDLLYDLLRARLAVSVTSSTRAREAEPDNAYVSASEQGAWSVLEALGAVGRRAFTATVAEACGLALAPRVPGARTGDELLAARRRRLGPSLSLSYASSGMPLYIRRGEGSWLFDEHDQAFLDCVNNV--CHVGHCHPRVVEAGAAQMARL---NTNTRYLHEGLVDYAEALCATLPAPLEVVYLVNSGSEANELALRLARDYTGGF------DVAVLDAAYHGNT---GNLVDM--SPYKFDAPGGRGRREWVHVLPT--PDPYR-GAHGDDGPAYAAAL-DAADAAARGRGSR-LAALFCESVLGCAGQVVPASGFLAAAYARARAAGAVCIADEVQVGFGRVGDGMWAFEAEGVVPDILTLGKPIGNGH-PLGA-VVTTRAIA---EALGGGRMEFFCTFGGNPVSAAVGAAVLAVIEDEGLVANARDTGSWLRGAFEQLAADPVLGRGIGEVRGRGLFIGVELVEDRSTK---RPDAARASAIVAHARARGVLLSTDGPARNVIKIKPPICFADVEARILASTLARALSATMR
5GHF Chain:A ((31-448))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLVIERGDGIYVEDVSGKRYIEAMSGLWSVGVGFSEPRLAEAAARQMKKLPFYH-------GPVIDLAEKLVSMAPVPMSKAYFTNSGSEANDTVVKLIWYRSNALGEPERKKIISRKRGYHGVTIASASLTGLPNNHRSFDLPIDR-------ILHTGCPHFYREGQAGESEEQFATRLADELEQLIIAEGPHTIAAFIGEPVMGAGGVVVPPKTYWEKVQAVLKRYDILLIADEVICGFGRTGN-LFGSQTFDMKPDILVMSKQLSSSYLPISAFLINERVYAPIA--------------SGHPVAAAVALENLAIIEERDLVANARDRGTYMQKRLRELQDHPL----VGEVRGVGLIAGVELVTDKQAKTGLEPTGALGAKANAVLQERGVISRAMG---DTLAFCPPLIINDQQVDTMVSALEATLN----


General information:
TITO was launched using:
RESULT:

Template: 5GHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2005 -16933 -8.45 -46.14
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -8.45
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.249

(partial model without unconserved sides chains):
PDB file : Tito_5GHF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5ghf-query.scw
PDB file : Tito_Scwrl_5GHF.pdb: