Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQAQFEKVIEVLFPDIIIQEVTAYEKGWDNDIFIVNKEIVFRFPRSEEVASKVKDEIILLKHLAHKEPKLDIPRYKGIEMDGNLKCVKY-NFMKGKSLSEIKNSRLDL------HSAELLGDFLSRLHSIELSALKETNITSFHTDTYWENLYESAKTYVFPNITHSERAEIQQFYEDFSNNPIYSNVNKAVIHGDLTAANILYNKEEECVSGIIDFTDAQIADPAFDFAGLY---WAYGPEFTKKLLTYYDGKDKTGIFE--RVQSFYGLQPIFHELIYAVKENHDVDWGSALERFQYLNSHR
3SG9 Chain:A ((8-287))----QVEKAIEQLYPDFTINTIEISGEGNDCIAYEINRDFIFKFPKHSRGSTNLFNEVNILKRIHNKLP-LPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDN--KKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWS---FEKIIYG-KEYGYMDW--------------


General information:
TITO was launched using:
RESULT:

Template: 3SG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1191 -29502 -24.77 -110.08
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -24.77
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.392

(partial model without unconserved sides chains):
PDB file : Tito_3SG9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3sg9-query.scw
PDB file : Tito_Scwrl_3SG9.pdb: