Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQAALAPGGFDEFEMHQVLKRGCAAVGLDSSEARLLRGHTNAVIHLVKE---HVVVKIARKGS-RIDDVARTVRFVRWLMDAGFPTVSLHPVDQP--VGVGQHALTFWEYL----PQPSDPVPAAQLAKPLYSLHTLPASP-----EALPAHDNLAAIRRSLKSITCLSDEALAFLNGSTEQLESALHVV-QFELPEGVIQGDPQHRNALHTASGGAVLCDWDTVAIGQPEWDL--VTVEVHCRRFGHGSQHYEAFANTYGWDVTRWSGYQTLAAIRELRMITTNAR--------KVSDAPTSLQEVERRVEGLRCHDRALRWNIL------
1ZYL Chain:A ((4-328))---SAFTFQTLHPDTIMDALFEHGIR---VDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILW--RDGPMFVDLDDARNGPAVQDLWMLLNGDKAEQRMQLETIIEAYEEFSEFDTAEIGLIEPLRAMRLVYYLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVLQEPPLQLTPMY


General information:
TITO was launched using:
RESULT:

Template: 1ZYL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1341 -1525 -1.14 -5.20
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -1.14
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.341

(partial model without unconserved sides chains):
PDB file : Tito_1ZYL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1zyl-query.scw
PDB file : Tito_Scwrl_1ZYL.pdb: