Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTHVHFPWYLHSIRKQRRNTCNILQNLVSNSKTSLQNAPVLYLRFLASYRVSSETTASEAICLPTIAEIEAATELISAPDASAKVVRVNERFAVKMGYGI-----PLIEAENMKFLAAN-SKVPVPKVHAAFRDPDTNKTYIIMEYLPGHTLEK-LLPSLDPVEKATISNLIKDAITELRKGLDPKISGPFAN-----QGDMNLAI---IEKIRQ--TESDQYIRLLRNMIDRTL-----NSHRSVFTHGDLQPKNIMVERFGDRNVCPQFRISLLDWESAGWYPELWDFCNATIACRFKPDWLELVPDILEQYPVEFLMMQVVYSSVFY
4DCA Chain:A ((45-272))-----------------------------------------------------------------------------LSSGDDSDTFLCNEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ------SDRFNIMKYIKGERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNR--------LFGVIDFGDFNVGDPDNDFLCLLDCST-DDFGKEFGRKVLKYYQHKAP-----------


General information:
TITO was launched using:
RESULT:

Template: 4DCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 729 -3263 -4.48 -15.84
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -4.48
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.263

(partial model without unconserved sides chains):
PDB file : Tito_4DCA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4dca-query.scw
PDB file : Tito_Scwrl_4DCA.pdb: