Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHSRPQISPERAAQLAAEWFEGQLDAPAELDSYADRNFLVRAPDGTKAVLKVPNVELAEDIDLQIAILKWLEARPSAPLVPRVLGPTRTIEDDAGRPTRAWMVGWIEGELWFDASPTPALREELGAALGQLARDLEDFRHPGMERHFAWNLAEANWIAEELHRFEDPARAELVCDALMQFQGRVLPRLAELPTQVIHGDANDKNLAVAEGRLVGVFDFGDACWCPAVCDLAIALAYAAMDLRLGCALPEVAAACAQVCAGYHGRRPLTALELDLLYDLLRARLAVSVTSSTRAREAEPDNAYVSASEQGAWSVLEALGAVGRRAFTATVAEACGLALAPRVPGARTGDELLAARRRRLGPSLSLSYASSGMPLYIRRGEGSWLFDEHDQAFLDCVNNV--CHVGHCHPRVVEAGAAQMARL---NTNTRYLHEGLVDYAEALCATLPAP-LEVVYLVNSGSEANELALRLARDY------TGGFDVAVLDAAYHGNTGNLVDMSPYKFDAPGGRGRREW--------VHVLPTPDPYRGAHGDDGPAYAAAL---DAADAAARGRGSRLAALFCESVLGCAGQVVPASGFLAAAYARARAAGAVCIADEVQVGFGRVGDGMWAFEAEGVVPDILTLGKPIGNGH-PLGAVVTTRAIAEALGGGR-----MEFFCTFGGNPVSAAVGAAVLAVIEDEGLVANARDTGSWLRGAFEQLAADPVLGRG--IGEVRGRGLFIGVELVEDRSTKR---PDAARASAIVAHARARGVLLSTDGPARNVIKIKPPICFADVEARILASTLARALSATMR
5LHA Chain:D ((37-455))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVIARGDGNYITDIDGQRMLDGVGGLWNVNIGHNRASVKAAIAAQLDELAYYQTFDGIAHPRVFDLAERLTGMFAQERMARVLFSSGGSDAVETALKMARQYWIASGEPGRTRFLSLRNGYHG-----VHMGGTSV---GGNGVYHYNHGQLLAGCHLLDTPWLYRNPWDCRDPQALTAHCIRQLEEQIALLGAQTIAALIAEPVQGAGGVIVPPADYWPRLREVCDRHGILLIADEVVTGFGRSG-CMLGSRGWGVAPDILCLAKGITAGYIPLGATLFNQRIADAIENGQGFSHMIMHGYTYSGHPTACAAALAVLDIVEAEDLPGNAAKVGAQL---LEQL--QPLVERYAVVGEVRGKGLMIALDLVSDKRTRQPLDPAAGQPSRIADEARRAGVLVR---PIGNKIILSPPLTLTRDEAGLMVSALEAAFA----


General information:
TITO was launched using:
RESULT:

Template: 5LHA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 2087 -52658 -25.23 -136.77
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain D : 0.65

3D Compatibility (PKB) : -25.23
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.254

(partial model without unconserved sides chains):
PDB file : Tito_5LHA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5lha-query.scw
PDB file : Tito_Scwrl_5LHA.pdb: