Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHSRPQISPERAAQLAAEWFEGQLDAPAELDSYADRNFLVRAPDGTKAVLKVPNVELAEDIDLQIAILKWLEARPSAPLVPRVLGPTRTIEDDAGRPTRAWMVGWIEGELWFDASPTPALREELGAALGQLARDLEDFRHPGMERHFAWNLAEANWIAEELHRFEDPARAELVCDALMQFQGRVLPRLAELPTQVIHGDANDKNLAVAEGRLVGVFDFGDACWCPAVCDLAIALAYAAMDLRLGCALPEVAAACAQVCAGYHGRRPLTALELDLLYDLLRARLAVSVTSSTRAREAEPDNAYVSASEQGAWSVLEALGAVGRRAFTATVAEACGLALAPRVPGARTGDELLAARRRRLGPSLSLSYASSGMPLYIRRGEGSWLFDEHDQAFLDCVNNV--CHVGHCHPRVVEAGAAQMARL---NTNTRYLHEGLVDYAEALCATLPAP-LEVVYLVNSGSEANELALRLARDY------TGGFDVAVLDAAYHGNTGNLVDMSPYKFDAPGGRGRREW--------VHVLPTPDPYRGAHGDDGPAYAAAL---DAADAAARGRGSRLAALFCESVLGCAGQVVPASGFLAAAYARARAAGAVCIADEVQVGFGRVGDGMWAFEAEGVVPDILTLGKPIGNGH-PLGAVVTTRAIAEALGGGR-----MEFFCTFGGNPVSAAVGAAVLAVIEDEGLVANARDTGSWLRGAFEQLAADPVLGRG--IGEVRGRGLFIGVELVEDRSTKR---PDAARASAIVAHARARGVLLSTDGPARNVIKIKPPICFADVEARILASTLARALSATMR
5LH9 Chain:C ((37-455))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVIARGDGNYITDIDGQRMLDGVGGLWNVNIGHNRASVKAAIAAQLDELAYYQTFDGIAHPRVFDLAERLTGMFAQERMARVLFSSGGSDAVETALKMARQYWIASGEPGRTRFLSLRNGYHG-----VHMGGTSV---GGNGVYHYNHGQLLAGCHLLDTPWLYRNPWDCRDPQALTAHCIRQLEEQIALLGAQTIAALIAEPVQGAGGVIVPPADYWPRLREVCDRHGILLIADEVVTGFGRSG-CMLGSRGWGVAPDILCLAKGITAGYIPLGATLFNQRIADAIENGQGFSHMIMHGYTYSGHPTACAAALAVLDIVEAEDLPGNAAKVGAQL---LEQL--QPLVERYAVVGEVRGKGLMIALDLVSDKRTRQPLDPAAGQPSRIADEARRAGVLVR---PIGNKIILSPPLTLTRDEAGLMVSALEAAFA----


General information:
TITO was launched using:
RESULT:

Template: 5LH9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 2120 -56056 -26.44 -145.60
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain C : 0.65

3D Compatibility (PKB) : -26.44
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.256

(partial model without unconserved sides chains):
PDB file : Tito_5LH9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5lh9-query.scw
PDB file : Tito_Scwrl_5LH9.pdb: