Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNAEIKDKNYKKLKRNAQNIILKYLGEKREIDGVYNNNWVFLT---TDNKKPY-----MVKFVPQNEARRLEIENTMYKFITSKTDIPVPEVLTYGQNQHGSYLLREVIEGHSLKEYFKKTRNVENIFYEAGQILAKLHSIEFEDKGIIKPDLSVKKYDIFSKTEYLFFLEKLFVNGVISREK---YSLLKKVDINYYFGGRKNVLCHCDYTPNNILVK-NNQIVGIIDFEWASSAPFMDDLVSFDLFAELDGFNRQINSYYKGYKLIKEIDKFYFENINFYKFYRLITMLSYQVGVTDERYDYQFYNKMRKRFKDIIANCQF
5IQF Chain:A ((46-232))------------------------------------NNEYIFKTKFSTNKKKGYAKEKAIYNFLNTNLETNVKIPNIEYSYISDELSI-----LGYKEIK-GTFLTPEIYSTMSEEEQNLLKRDI-------ASFLRQMHGLDYTDISECTID---NKQNVLE--EYILLRETIY-NDLTDIEKDYIESFMERLNATTVFEGKK-CLCHNDFSCNHLLLDGNNRLTGIIDF---GDSGIIDEYCDF------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IQF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 539 -10599 -19.66 -60.56
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -19.66
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.201

(partial model without unconserved sides chains):
PDB file : Tito_5IQF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqf-query.scw
PDB file : Tito_Scwrl_5IQF.pdb: