Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWQAISHLLNEQLGEGDIELRNELPGGEIHAAWHLRFAGRDLFVKCDEREL-LPIFTAEADQLELLSRSKTVSVPKVWALGS-DRDYSFLVMDYLPARPLDA------------HNAFLLGQQIARLHQWSDQPQFGLDFDNDLSTTPQPNAWQRRWSTFFAEQRIGWQLELAAEKGLAFGNIDAIVDHVHQRLASHQPQPSLLHGDLWSENCALGP----NGPY-IFD-PACFWGDRECDLAMLPLH-PEQPPQIYDGYQAVSPLPPDFLDRQPIYQLYTLFNRAILFG----GEHLVNAQRALDRVLAA
3TDW Chain:A ((5-297))-KLHYTTMIMTQFPDISIQSVESLGEGFRNYAILVN---GDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVET-AIS-AGV---PVTNLKNKILLLSEAVEDQV----FPLLDE-S-LRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDYDYVYLLEDCGELFTRQVMAYRGEVDLDTH-IRKVSLFVTFDQVSYLLEGLRARDQDWISEGLELLEEDK--


General information:
TITO was launched using:
RESULT:

Template: 3TDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1214 -33286 -27.42 -124.20
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -27.42
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.367

(partial model without unconserved sides chains):
PDB file : Tito_3TDW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3tdw-query.scw
PDB file : Tito_Scwrl_3TDW.pdb: