Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTHVHFPWYLHSIRKQRRNTCNILQNLVSNSKTSLQNAPVLYLRFLASYRVSSETTASEAICLPTIAEIEAATELISAPDASAKVVRVNERFAVKMGYGIPLIEAENMKFLAANSKVPVPKVHAAFRDPDTNKTYIIMEYLPGHTLEKLLP-SLDPVEKATISNLIKDAITELRKGLDPKISGPFANQGDMNLAII---EKIRQTESDQYIRLLRNMIDRTLNSHRSVFTHGDLQPKNIMVERFGDRNVCPQFRISLLDWESAGWYPELWDFCNATIACRFKPDWLELVPDILEQYPVEFLMMQVVYSSVFY
1TQM Chain:A ((1-282))MN--------------------------IAELYGKMGKHSWRIMDAIFKNLWDYEYVPLQLISSHARIGEEKARNILKYLSDLRVVQNRQKDYE---GSTFTFIGLSLYSLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVKVKEHFSVLAIRSARNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG---------IWIIDF------PQSVEVGEEGWREILERDVRNIITYFSRTYRTEKDINSAIDRILQE


General information:
TITO was launched using:
RESULT:

Template: 1TQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1322 -68615 -51.90 -258.92
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -51.90
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.214

(partial model without unconserved sides chains):
PDB file : Tito_1TQM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1tqm-query.scw
PDB file : Tito_Scwrl_1TQM.pdb: