Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAENLSQMGAANVQRLVDQYGQ-----------------------------QVIEKCPVSPVEYAFYERAAEELNSRGIKTPTLLSAD------PHPRRLRLEYIPGKVS---QDEVSGDDILKCLSHLHHTPPDPTWVYHPHSWPEKALEKSLALLR----LPDRAAHQMRCFQQAGSVLFRQ-------KCLISGDTNAGNWGRRENGEWVLFDWERFGTGSPAIDLAPLVKG--MGSRQSILQLAERYSVHCPHMPARQLATEITLAKAWIVSEVMSLLYDRNKTDFELYLNWYRETLPGWLDEAISVL------------------
1ZYL Chain:A ((4-328))-SAFTFQTLHPDTIMDALFEHGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR--DGPMFVDLDDARNGPAVQDLWMLLNGDKAEQRMQLETIIEAYEEFSE-FDTAEIGLIEPLRAMRLVYYLAWLMRRWADPAFPKNFPWLTG--EDYWLRQTATFIEQAKVLQEPPLQLTPMY


General information:
TITO was launched using:
RESULT:

Template: 1ZYL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1094 -37826 -34.58 -147.76
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -34.58
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.384

(partial model without unconserved sides chains):
PDB file : Tito_1ZYL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1zyl-query.scw
PDB file : Tito_Scwrl_1ZYL.pdb: