Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMEFQLDQEWRLRPI-KGDTGKTYIGMRDE----------DKVFIKRNTTP------------MLAALSREGITPKLVWTKRTGNGDTLTAQEWLEGRLLTPN---EIGQRNDVIDVLYHLHHSNSLKTMLTRIGGRVMTPEKMLQKYEKELPEEL------Q----KNQFLQIVHRFLREQIP-SIDKENLSVVHGDVNHRNWLVCKNYLYLVDWDSIMFADPAVDIATILGNYV-------------------PLSSWNQWLISYGIRPT----------DEMLEKFHWYAAMNLLQEITRYCKREDHRRMNEEILQLKRIFSG
3C5I Chain:D ((34-331))-------DNLRVKQIL--LTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF---N--GGRIEEWLYGDPLRIDDLKNPTILIGIANVLGKFHTLSRKRHLPEHWD-RTPCIFKMMEKWKNQLFKYKNIEKYNCDIHKYIKESDKFIKFMKVYSKSDNLANTIVFCHNDLQENNIINTNKCLRLIDFEYSGFNFLATDIANFFIETSIDYSVSSYPFFEIDKKKYISYENRKLFITAYLSNYLDKVVPTPKLIDEILEAVEVQALGAHLLWGFWSIIRGY-----------------


General information:
TITO was launched using:
RESULT:

Template: 3C5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 804 -8800 -10.94 -38.59
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain D : 0.64

3D Compatibility (PKB) : -10.94
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.412

(partial model without unconserved sides chains):
PDB file : Tito_3C5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3c5i-query.scw
PDB file : Tito_Scwrl_3C5I.pdb: