Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSNNNNPLTRDEILSRYFPQY--RPAVATSQGLSGGSCIIAHDTHRVVLRRHHDPDAPPAHFLRHYRALSQLP-ASLAPRALFYTP--GWMAVEYLHGV-VNSA------LPDADELAALLYHLHQQPRFGW-RIALSPLLAQYWSCCDPAR--R---TPFWLRRLKQLQKNGEPRPLRLAPLHMDVHGDNIVLTSAGLRLIDWEYAGDGDIALELAAVWVEDER---QHRQLADAYAARARIDARQLWRQIRLWHPWVIMLKAGWFEYRWRQTG-EQQFIRLADETWRQLRMKG
3DXQ Chain:B ((3-280))-----TDEAR--AKLAAIPMLAGYTGPLERLGGLTNLVFRA----GDLCLRIP--------NRANEAVAAREAAKAGVSPEVLHVDPATGVMVTRYIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAACHCDPLCENFLDTGERMWIVDWEYSGMNDPLWDLGDLSVEGKFNANQDEELMRAYFGGEA--RPAERGRVVIYKAMCDLLWTLWGLIQLANDNPVDDFRAYADGRFAR-----


General information:
TITO was launched using:
RESULT:

Template: 3DXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1176 -18574 -15.79 -74.89
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.70

3D Compatibility (PKB) : -15.79
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.337

(partial model without unconserved sides chains):
PDB file : Tito_3DXQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxq-query.scw
PDB file : Tito_Scwrl_3DXQ.pdb: