Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVELAPALEEVLRPVLGD-VTVENLQRLTGGASRTTWAFSAHARSRSGTAHARSESDTAHARSESDTAQTGGAGRPLILRTGARDDIHASMELEAKVQQRAAAAGAPVPHIVNADNSPAAVGAPYLICDAIAGETIVRRIFRGLDDGGRARLLEQCATALAAIHRADPAGIGLTSP--------DDLAGWRSRLDEIG-DTTATFEWTFRRLADARP--EPSPMRLVHGDFRMGNLIVDES--GLAAVLDWELTHIGEIYEDLAWFCIRAWRFGAP------ETLGAGGLGSVETFLQAYESAADTSLDRNTFRWWLTVATLRWGVICRHQAERHLSGESPSVELAAIG---RRVSETEWDLLELLSGGGPR
3DXP Chain:A ((22-355))----DTEALEAWMRQHVEGFAGPLSVEQFKG-QSNPTFKLVTPG---Q----------------------------TYVMRAKPG-----AIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGHPMGDFGYHCMSWHIAPGQFRGIAGLDHAALGIPDEASYRKLYEQRTGRPIT-GDWNFYLAFSMFRIAGILQGIMKRVVDGTASSAQALDAGKRARPMAEMGWEYAK--------


General information:
TITO was launched using:
RESULT:

Template: 3DXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1344 -15403 -11.46 -51.34
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -11.46
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.387

(partial model without unconserved sides chains):
PDB file : Tito_3DXP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxp-query.scw
PDB file : Tito_Scwrl_3DXP.pdb: