Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMHSRPQISPERAAQLAAEWFEGQLDAPAELDSYADRNFLVRAPDGTKAVLKVPNVELAEDIDLQIAILKWLEARPSAPLVPRVLGPTRTIEDDAGRPTRAWMVGWIEGELWFDASPTPALREELGAALGQLARDLEDFRHPGMERHFAWNLAEANWIAEELHRFEDPARAELVCDALMQFQGRVLPRLAELPTQVIHGDANDKNLAVAEGRLVGVFDFGDACWCPAVCDLAIALAYAAMDLRLGCALPEVAAACAQVCAGYHGRRPLTALELDLLYDLLRARLAVSVTSSTRAREAEPDNAYVSASEQGAWSVLEALGAVGRRAFTATVAEACGLALAPRVPGARTGDELLAARRRRLGPSLSLSYASSGMPLYIRRGEGSWLFDEHDQAFLDCVNNVCHVGHCHPRVVEAGAAQMARLNTNTRYLHEGLVDYAEALCATLPAPLEVVYLVNSGSEANELALRLARDYTGGFDVAVLDAAYHGNTGNLVDMSPYKFDAPGGRGRREWVHVLPTPDPYRGAH---GDDGPAYAAALDAADAAARGRGSRLAALFCESVLGCAGQVVPASGFLAAAYARARAAGAVCIADEVQVGFGRVGDGMWAFEAEGVVPDILTLGKPIGNGHPLGAVVTTRAIAEALGGGRMEFFCTFGGNPVSAAVGAAVLAVIEDEGLVANARDTGSWLRGAFEQLAADPVLGRGIGEVRGRGLFIGVELVEDRSTKRPDAARASAIVAHARARGVLLSTDGPARNVIKIKPPICFADVEARILASTLARALSATMR
5G4J Chain:A ((18-439))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLLARRYATIGPHSPLFYR---QPLELVSGSGVWLTDAQGKVYLDGYNNVPHVGHANPAVADAIYQQLLTVNLHTRYLNSRVVEYAEALLSKFDGALERLFLTNSGSEANELALRIARQHTGNTGVLVSDFSYHGNTTSLAEITTGLTVHE---PLGAHVRALRIPDVSGIAEVDVPVLLEQSLADVDAAIASLQAAGHGVSVFLFDPLFSTEGLLQLPSGYIEGVATRVRAAGGLVISDEVQSGFGRTGSGMWGYQMFNVEPELVTMGKPMGNGHPIGAVVTTAELLDEFGRH-NMFFNTFAGNPVSSAAGLAVLRYMDQEDLMAKADQLGKYIRKRLENIAQR---SGNVGSVRGRGLFFGIDIIESDGSRNPAPALTKILIEDMRERGVLISRVGPHDNVLKMRPPLVFGREHADILLGQLELSLASLP-


General information:
TITO was launched using:
RESULT:

Template: 5G4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2363 -86218 -36.49 -205.77
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -36.49
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.281

(partial model without unconserved sides chains):
PDB file : Tito_5G4J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5g4j-query.scw
PDB file : Tito_Scwrl_5G4J.pdb: