Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNRLHAFIDLDRGAVADLTADYSLGELRSVEPLVTGIINTNYVLRTDAGDFLLRLYPPERSADALRFEFSTLARLAEANFPCPRVIANREGKTVAWSEAHARHYAVLEFIPGTTLPREAIDAGVVDQIGSLFADMQRTLSGFVPEGDKPRADLEFVRELGQATLDRIAALPGEGPATAERLRQVWARSHARFDQPKGSVPALERGVVHADLYFDNVIVEGDQIRGVIDFDDSYFGLFLIDLAVTLMEFTFVEADALDFELGERLLRRYYARRPEAKGEAHLLHDGMICACYKYLGYTADLPEYAGEALLGNEYIARIDYLARPEIRAKVEAMIAAAVEVPA 2PPQ Chain:A ((5-282)) -------TDITEDELRNFLTQYDVGSLTSYKGIAE---NSNFLLHTTKDPLILTLYEK---KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELS--GRPAALISFLEGMWLRKPEAKHC--REVGKALAAMHLASEGFEIKR-PNALSVDGWKVLWDKSEE---RADEVE-----KGLREEIRPEIDYLA-AHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACNDLLAYDVSICLNAWCFEKDGAYNVTKGKALLEGYQSVRPLSEAELEALPLLSRGSALRFFLTRLY------------------------------------------

General information: TITO was launched using: RESULT: Template: 2PPQ.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1286 -171174 -133.11 -629.32 target 2D structure prediction score : 0.56 Monomeric hydrophicity matching model chain A : 0.68 3D Compatibility (PKB) : -133.11 2D Compatibility (Sec. Struct. Predict.) : 0.56 1D Compatibility (Hydrophobicity) : 0.68 QMean score : 0.378

(partial model without unconserved sides chains): PDB file : Tito_2PPQ.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2ppq-query.scw PDB file : Tito_Scwrl_2PPQ.pdb: