Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEDKKMLHILNNLYNINFKTMEFLREGGCISYRLSSENSSYFMKIISSAFMDTAKQSLSIISYLTQKGFPSPRIIHTKEGLPYVEIEELNKKTLIVLFEFIEGSEPN--EGEDIETIGKLVGQLHNILKGYKEPL--PVHG-KEFFIDRY---IKILEQKNY------DQN-------KI----DTFREYGDVLWE-------NVKNLPHGFCHGDLHRGNLLKTTTKKYYLLDFDTSSYAFPMYDIMVMCNSTDYFNFNEIGYQKSKNTYETFLKGYTKYRSLSKDELNSFYDFIAIYHYQLQATIIEIYGLNCVDIEFLDNQLNWLMKWREQCKAR
2Q83 Chain:A ((26-305))---------VLQGWDVQAEKIDVIQ---ALVWKVHTDSGAVCLKRIHRPE-KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHG----SFLFVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKMIIPLLDTT-----GVWDDETFNVMLNAYESRAPLTEEQKQVMFIDMLF----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2Q83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 932 -24837 -26.65 -101.79
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -26.65
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.374

(partial model without unconserved sides chains):
PDB file : Tito_2Q83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2q83-query.scw
PDB file : Tito_Scwrl_2Q83.pdb: