Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MKELSRLVHRSFHIIPRQEDFRPLALGASGRTIVRIHFGGRTCIGI-QWGNDRADN-DSFIPAARHLHAHGVNVPEIYDYEPLGPGCGAALVEDLGDANLLAFRKEPWPSLR-LRYIRAMEQLHLLHSCPFPEEFPLQPAFDEALYRW-EQSYFAEHFLGSHLGLETASFLNHPALKEQAQFLAALPE-CPVHRDSQSQNVHIH-----AGKTWLIDFQGMRGGRPEYDLASLVYDGYARLEPEQADEL-LREWENISAHSIDH--RIFRACALQRIM-QMLGAYANIGHNQGKTWYLAQIPAGLGHLRKLLPGSTLAEPLAAMLA---------------
3CSV Chain:A ((4-333))SREDEIRDFLATH-----------GYADWNRTPRYQRLRSPTGAKAVLMDWSPEEGGDTQPFVDLAQYLRNLDISAPEIYAEEHAR---GLLLIEDLGDALFTEVINND-PAQEMPLYRAAVDLLIHLHDAQTPE----LARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHRAYDLVSLLQDARRDV-PAQVEAQMIDHYIQATGVDESHFRSAYAVIAVQR-NMRILGIFARLSQRFGKRHYIEFVPRVWAHFERGLAHPALASAAEEILNALPAPAPEVLERLRA


General information:
TITO was launched using:
RESULT:

Template: 3CSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1345 -8684 -6.46 -29.84
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -6.46
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.353

(partial model without unconserved sides chains):
PDB file : Tito_3CSV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3csv-query.scw
PDB file : Tito_Scwrl_3CSV.pdb: