Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLEKWIEEKFNTTKYTLEKTDKGISNHNYILTINDTKYMIRVPKKNHESLGLQHEHEKKILTLVSDL--DVPTVLFDEKEGIKVTHYIEDVKTFNECKDKDKFARCANLMKSLHTKKAPLFI-FNPFGKIEFYKSQIKECI--VSFPNEENFLEALKKEYKPNTL----CHNDFVQGNILYS-DTKDYLIDYEYAAKNDYRFDIASFFSENNIHYIDQRDQFYQTYFDGEIDPMIDVQVQAFERMEDILWGYWANMLYEQRGEQIYFDIAKDKEKHYRG
4R77 Chain:B ((27-263))-----------------------GMTNQNYLAKTTNKQYIVKFFGKGTEKL-INRQDEKYNLELLKDLGLDVKNYLFDIEAGIKVNEYIESAITLDSTSIKTKFDKIAPILQTIHTSAKELRGEFAPFEEIKKYESLIEEQIPYANYESVRNAVFSLEKRLADLGVDRKSCHIDLVPENFIESPQGRLYLIDWEYSSMNDPMWDLAALFLES--EFTSQEEETFLSHYESDQTPVSHEKIAIYKILQDTIWSLW-TVYKEEQGE----------------


General information:
TITO was launched using:
RESULT:

Template: 4R77.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 981 27045 27.57 119.14
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : 27.57
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.358

(partial model without unconserved sides chains):
PDB file : Tito_4R77.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4r77-query.scw
PDB file : Tito_Scwrl_4R77.pdb: