Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAETH----TAIVFFAGDRAYKVKKAVD-LGFVDYTDRQARRAACV-----------------REVALNRRFAPD------VYLGVGEVVAPDAEVSEPLVVMRRMPAGRRLSALVRAGADVDEVLRAVARRLAAWHATAPRGRDVDEQGTRDALASRWE--------------ASFEQVRATTEGGSGFDGVPEVQ----------RLVRRYLAGR--EALFDSRIEQRRVVDGHGDLLAEDIFCLDD--GPRVLDCLEFDDHLRYVDGLDDAAFLAMDLEQLGA------------------------PAAAARFLARYGEYSGDPAPPSLWHHYVAYRAFV----------------RAKVSLIQAEQGAPG--VRSAARRLVSTTLRHLRTSAVGLTLVGGLPGSGKSTLSGALADRLG------VTLLSSDRLRKELAGIPPESPAPAAYEEGLYTPEWTARTYDILLDRAAALLSRGESVVLDATWSAAELRAAAGRVAERTCADLVALHCQVPDEVAAAR-----LSTRSPGPSDADLGVADALAAREPPWPDAVVVDTSGPLESAVSRALAAVRPWGTDQAPVFRRPSAEPDQDRGAGSSLP
1I2D Chain:A ((2-573))ANAPHGGVLKDLLARDAPRQAELAAEAESLPAVTLTERQLCDLELIMNGGFSPLEGFMNQADYDRVCEDNRLADGNVFSMPITLDASQEVIDEKKLQAGSRITLRDFRDDRNLAILTIDDIYRPDKTKEAKLVFGGDPEHPAIVYLNNTVKEFYIGGKIEAVNKLNHYDYVALRYTPAELRVHFDKL-GWSRVVAFQTRNPMHRAHRELTVRAARSRQANVLIHPVVGLTKPGDIDHFTRVRAYQALLPRYPNGMAVLGLLGLAMRMG-GPREAIWHAIIRKNHGATHFIVGRDHAGPGSNSKGEDFYGPYDAQHAVEKYKDELGIEVVEFQMVTYLPDTDEYRPVDQVPAGVKTLNISGTELRRRLRSGAHIPEWFSYPEVVKILRESNPPRATQGFTIFLTG-YMNSGKDAIARALQVTLNQQGGRSVSLLLGDTVRHELSSELG------------FTREDRHTNIQRIAFVATELTRAGAAVIAAPIAPYEESRKFARDAVSQA-GSFFLVHVATPLEHCEQSDKRGIYAAARRGEIKGFTGVDDPYE--TPEKADLVVDFSKQSVRSIVHEIILVLESQGFLERQ--------------------


General information:
TITO was launched using:
RESULT:

Template: 1I2D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2349 56814 24.19 122.71
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 24.19
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.335

(partial model without unconserved sides chains):
PDB file : Tito_1I2D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1i2d-query.scw
PDB file : Tito_Scwrl_1I2D.pdb: