Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----MEEALARHDRFGEDFSKVFTIINSAEIPAVENSALYLFVGTSRAPDEASKYVRDR-----VAQNAQSSTLEETLHSIHE---ELKILSKKMTREDPMNLDPEIEAALYERDGGCCFITGRTAGVQPIYIIPPSILEDKDLQPGGYLRPLLEVSLTKEGTEQMLNLLGLPGRENVLKNLILMEPSIRYSFRHGYFEIIKSPYLEPPYLPTDAPKSKNGGWWLQPIAPQSEVPQIIPRNNELYKVPSTINPISHPLPARLLLKTHGIVSHPLHTIYIEEQIKAGWPVEPEPKELNWVGRLLLQILLRLIPNFARIRLYELIYKMVDYWDPSQKGSHVKFLPLGLVLKKGRENTENEAKALTL----AEQY---ISISTPRLIDSVMVNKTSGFILMTKVVGRS-LSSILHRITWEELEQIGKDLANFITELRRIPNSSKYLIADTRGGPISDHRFFYQTWGPFKTVSGFTDRLLQDVKGARDKPPLSFLYEKKHKVYFTHSDIHMTNLFVTCGRLSGVVDWENAGFKPEYWEYIRAMWAYGADKHAKCLYGSAFGDKYKEEGGIEITAVWIGFSLTTFSGFSGLIFEQLIRLRNEYLPLAQGKISPDVNPGHLCSTAKTSYTSAFARWEAVPARPMPTSQSGPITAKDAFKG
5LB8 Chain:D ((4-444))PERRVRSTLKK--VFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQERKELLADLEREKPQ---------------TKILYITPEMAASSSFQP--TLNSLVS--------------------RHLLSYLVVDEAHCVSQWGHDF---------RPDYLRLGALRSRLGHA-----------------------------------PCVALTATA--------TPQVQEDVFAAL-------------HLKKPVAIFKTPCFRANLFYDVQFKEL-ISDPYGNLKDFCLKACGIVYCRTREACEQLAIELSCRGVNAKAYHAGLKASERTLVQNDWMEEKVPVIVATISFDKANVRFVAH---WN----IAKSMAGYYQESGR---------AGRDGKP-SWCRLYYS---------------------RNDRDQVSFLIRKEVAKLQEKR-----------------------------------------------------GNKASDKATIMAFDALVTFCEEL-----GCRHAAIAKYFGDALPACAKGCDHCQNP-----------TAVRRRLEALERSSS----------------


General information:
TITO was launched using:
RESULT:

Template: 5LB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 2074 68026 32.80 167.55
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain D : 0.63

3D Compatibility (PKB) : 32.80
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.204

(partial model without unconserved sides chains):
PDB file : Tito_5LB8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5lb8-query.scw
PDB file : Tito_Scwrl_5LB8.pdb: