Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLFENESMGFNHDEICATWNIPPLVSVQKPLTGTIHNVFLLTTREAKYVLRIYSYPPEKRFRIVNEHAIARYVQSHHLPAIAPLPISSGCETFLERDGHFYALYPFAQGEQLSRAMLNSNQSHVGEIISAMGHSLAEVHLVLSSYCLPTTRP-LSLVVNREQTIAKIEELEIVIPAKEALDDLDQRVLSALRARKQYLLTASDVDVSELNALPWQPLHGDFQETNLFFSHGRVSAIIDWDQACSGPRAWEILRTLHYVFAL-----DPSRCQRFLEAYQQVFPLPMEVLHLTAKVYTWVQLNNLWGWRSYYLDNNQSLRQLLSTSDSQPFTTRWAQLAKML
2PPQ Chain:A ((5-268))----TDITEDELRNFLTQYDVGSLTSYKGIAE---NSNFLLHTTKDPLILTLYEK--KND--LPFFLGLMQHLAAKGLSCPLPLPRKDGE-LLGELSGRPAALISFLEGMWLRK--PEAKH------CREVGKALAAMHLASEGFEIKRPNALSVDGW-----KVLWDKSEERAD---EVEKGLREEIRPEIDYL----AA-----HWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACNDLLAYDVSICLNAWCFEKDGAYNVTKGKALLEGYQSVRPLSEAELEALPLL----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PPQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1098 -116124 -105.76 -460.81
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -105.76
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.301

(partial model without unconserved sides chains):
PDB file : Tito_2PPQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ppq-query.scw
PDB file : Tito_Scwrl_2PPQ.pdb: