Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVCRALIPE-LQDADDSDFDVCRINGGITNISDGRFLSFAVAKVSKKD---------QSVVVRVFGPATEGVIDRDREIQATCHLSRAGFCPELKGVFKNGIIQTFVTARTLTPEDFLDDAVVAKVAKELRRLHQQEVPGEKES-MVWTEINRYFELASAVTKFESPEDQRKLEAVSFDELRQEINTLKEIGARLKGPVVYAHNDLLPGNVMVDAQG----DKCYYFIDFEYSGYNYRGFDIGTHFNEYAGFDC---------DFCAYPSKDRQLNFLRHYLRPDDPEK---A----THEELEELFVEANFYALAAHITWSAWAIVQATSSAAIDFDYMSYFFKRMKMYREQKAKFLPVVRGFLAGKSK
5FTG Chain:A ((16-376))-CKEFLPGAWRGLREDEFHISVIRGGLSNML---------FQCSLPDTTATLGDEPRKVLLRLYG------EAMVLESVMFAILAERSLGPKLYGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIK-FTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPFFRANIRKYPTKKQQLHFISSYLP-AFQNDFENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQAKIS-SIEFGYMDYAQARFDAYFHQKRKL-------------


General information:
TITO was launched using:
RESULT:

Template: 5FTG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1260 -8668 -6.88 -28.42
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -6.88
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.484

(partial model without unconserved sides chains):
PDB file : Tito_5FTG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5ftg-query.scw
PDB file : Tito_Scwrl_5FTG.pdb: