Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNTKTSHFSPLDFPEQLRTYIEGA-TLSDSSSHSGATVLYLDS-----GYYLKIDQ---KRRLERETAIARWFETKGLG-TPVIDYLS-TDKDYLLTKEAPGKDALAFLD----QPETICRTMAHALKKLHNLHPHNFPSENHLQTYKDRALKNYEKGEFYAKALLPQFQINSREEAFQLIQEQGHLLKTDAFIHGDACLPNFILKDASRFSCFIDLGLADFSDRHIDLFWAVWSLNYNLDNPKYAELFLDYYGREEVDTNKLRLVAAFEAFG
4GKI Chain:C ((12-272))--------SRPRLNSNLDADLYGYRWARDNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTA-FMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEG-KLIGCIDVGRVGIADRYQDLAILWNCLGEF--SPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF


General information:
TITO was launched using:
RESULT:

Template: 4GKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1006 -5098 -5.07 -20.72
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain C : 0.71

3D Compatibility (PKB) : -5.07
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.559

(partial model without unconserved sides chains):
PDB file : Tito_4GKI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4gki-query.scw
PDB file : Tito_Scwrl_4GKI.pdb: