Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKQPGQAVSWQEQRLEQAIAAMSDWQNKTIHYRPVSGGISNANWHVAVEGAPCAYFVKIPGEGTERFINRDTAHEASLKAAQTGYGVPVVAYLRDLGVEVFEFIDGWRASSNLDFQ-QQGIRHRALHALKSFNDQPLLTE-DKTVFDMLGEHIEQVRSLQAPFSADAVWLHKQAQRAQQALEAAGLDRVPCMNDTLAGNFMLNASNDIRLVDFEYASNNDRCYELALWFGEMFFTPQIELELLEDYFGK-VDAAIFARVQIHKYLADMKWSTWAIIQHQVADIDFDFSKYGRWKELRARSVLNHPDWENWLRAL
3DXQ Chain:B ((2-297))-----------MTDEARAKLAAIPMLAGYT-GPLERLGGLTNLVFRA------GDLCLRIP--------NRANEAVAAREAAKAGVSPEVLHVDPATGVMVTRYIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAACHCDPLCENFLDTG-ERMWIVDWEYSGMNDPLWDLGDLSVEGKFNANQDEELMRAYFGGEARPAERGRVVIYKAMCDLLWTLWGLIQLANDNPVDDFRAYADGRFARCKALMETPEFSRHLAAV


General information:
TITO was launched using:
RESULT:

Template: 3DXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1401 -52458 -37.44 -184.06
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.71

3D Compatibility (PKB) : -37.44
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_3DXQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxq-query.scw
PDB file : Tito_Scwrl_3DXQ.pdb: