Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKSKELEIVKK-LTNVADENNIVLNEDGWTSRVYIVNKGEIVLKFLKNKQYREEFEHEINILKLIKDHKF--NVNIPLISSS-EE-DNTYIVLNGLMGKSMSAEIVDALTKEEKRKIGTQIGLFLKKLHTVAYQGKSPNNESEIFEWFQKSFNRRKRTLKKHFNENELVAIEDLVTTLPQRSQKLGIVQVFCHGDLGYNNILLTD-SLEVGVIDFGDAGYNDQSYDFVGL-------EDDDMLDAVILAYDG--DEILKAKVEIRRQLLPLMEMLFLIDKKDKEGVQQCVKRVRINLKMHEIYNG
5IQI Chain:C ((12-302))--VKAMKYLIEHYFDNFK-VDSIEIIGSGYDSVAYLVN-NEYIFKTKFSTNKKKGFAKEKAIYNFLNTN-LETNVKIPNIEYSYISDELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNK-QNVLEEYILLRETIYNDLTDIEKDYIESFMERLNA-TTVFEGKKCLCHNDFSCNHLLLDGNNRLTGIIDFGDSGIIDEYCDFIYLLEDSEEEIGTNFGEDILRMYGNIDIEKAKEYQDIVEEYYPIETIVYGIKNIKQEFIENGRKEIYKRT--------


General information:
TITO was launched using:
RESULT:

Template: 5IQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1223 36214 29.61 131.21
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain C : 0.70

3D Compatibility (PKB) : 29.61
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_5IQI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqi-query.scw
PDB file : Tito_Scwrl_5IQI.pdb: