Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPAPPAVGQRTAWVDVPGDVRRGIEDVLGAPVIHAESQSGGFSPGTADRVRTSTGRRAFVKAVSPDQNPDSPEIHRREADYLAVLPASS-RLPKLIG------RYDDGYWIAMVMEEIDGECPPVPWSGAQVETAM-ETLAALAADLTPNPLPGLEPISEGFSPLFAGWRRLKDD-----------PPTDLDPWIAARLDDLIELSESTLPRIDGD-------------TVVHCDVRADNLLVRADGSMVVVDWPWALSGADWLDRFM-LLINIDLYGGHDVEDLVA-RHLTHVDPDLITGTLAG-LCA-FFVDSARQPPAPGLPTLREFQRAQGDSTLAWLRRRLTGDRGV-
2Q83 Chain:A ((11-346))LSAEDAKKLTELAENVLQGWDVQAEKIDV-------------IQALVWKVHTDSGAVCLKRI------HRPEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEGR--PFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKMIIPLLDTTGVWDDETFNVMLNAYESRAPLTEEQKQVMFIDMLFPYELYDVIREKYVRKSALPKEELESAFEYERIKANALRQLI


General information:
TITO was launched using:
RESULT:

Template: 2Q83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1227 -286 -0.23 -0.97
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -0.23
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.316

(partial model without unconserved sides chains):
PDB file : Tito_2Q83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2q83-query.scw
PDB file : Tito_Scwrl_2Q83.pdb: