Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSFFDTPIPEDQVFSNAPKCRTRREATRHYLDHVHYTEPQPDVPGEILHHIVHPFSMGSITDRQITLQDNGTICKSTRIGRSNLGAEKHHLELVAMKTSVPVPRVHQYYVSEEFEHLVMDNMPGTTLQQAWPTLSHLERKSIADQVVSLVQRLRELRSTHI-------NAALLFRRPLRDGLRDATDLSMERINPYLSDEHIAAYINKRSAIMEGQLNVFTHGDLDWGNILIADKQVCGLIDLESSGFFPPYWEWIMV-KRLSHSLPKDSWFRLLEERLGAEDHSNWQGMWEVEQLIMALDEFSRWDLTPAGREMNRHRGWTEVVRILGPGVGDPPVVLYEMAAEHPWWLVSAADGEVKFTSRREWPTLMKSKTAV
1J7L Chain:A ((2-264))-------------------AKMRISPELKKLIEKYRCVKDTEGMSPAKVYKLVGE-------NENLYLKMT-----DSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE--DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTE---KPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCVRSIREDIGEEQYVELFFDLLGIKPD------WEKIKYYILLDELF------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1J7L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1177 -29249 -24.85 -114.70
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -24.85
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.292

(partial model without unconserved sides chains):
PDB file : Tito_1J7L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1j7l-query.scw
PDB file : Tito_Scwrl_1J7L.pdb: