Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSINFSNLSKNINFINFSKISRGNNKELKYIVKDSEMNRYLFKINSIIH-LDNKVNEFRFAKRIEHLP--FEKSEIVDLCVFNQNRYICSIYKWIDGKILEDQ-IKNYPSNKQYSFGFKAGRSLKLIHDLPIRDEE---LK-------QVEELPVRKIIEYYHQ-NKRFENDNIIIDFILKNNS--KIKDEKICFLHGHYSIKNFIIKNNDEISLIDYNQCYFGDYVQDFSKNEIYNS-YYSEQFAQGIIDGYFYNRKIPDTFWLKYAYYAAYNCITLFLWASKQEVISTKIKIKEMIQNVLNQFNNFESIIPNWYKKNVLSKERQKFINSPYTLEKILGTPKKENKNDSKIKYFDEMYDDNDDDLLDEKMMDSFKEFLKNVAKK
3HAM Chain:A ((10-278))-----EHLNKQIKINELRYLSSGD-DSDTFLC----NEQYVVKVPKRDSVRISQKREFELYRFLENCKLSYQIPAVVYQ------SDRFNIMKYIKGERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILNNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFLCLLDCSTDDFGKEFGRKVLKYYQHKAPE--VAERKAELNDVYWSIDQIIYGYERKD--------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3HAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1048 12262 11.70 48.85
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 11.70
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.245

(partial model without unconserved sides chains):
PDB file : Tito_3HAM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ham-query.scw
PDB file : Tito_Scwrl_3HAM.pdb: