Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTMPQANIIPNDWWRWSDSQPVIIKPLLGGLTNLNYLISVNHELFVLRKNSAISEALNLNRSAEAKALSRADEAGLCAPLIYYDDQHQYMVSRYLGDKTW--SVSIDHNLSLLAELLRGIH----QLPGIDADLNVENKISCYWQAIDAQAAFTRELISLDSAVGAHITSAKALNNGHVLCHNDLLASNLIISNKDKLYAIDWEYAAMSDPFYELAVIIEGNALNAKQQQSLLTRYL--RQPISALDWQRLYHWQIIYGYLCVLWYAVQYSNGAMPNIVSEIHRQILAIKALAAKDA
4R7B Chain:A ((34-302))----------------SQEEEVLSVEQLGGMTNQNYLAKTTNKQYIVKFFGKGTEKL-INRQDEKYNLELLKDLGLDVKNYLFDIEAGIKVNEYIESAITLDSTSIKTKFDKIAPILQTIHTSAKELRGEFAPFE---EIKKYESLIEEQIPYAN-YESVRNAVFSLEKRLADLGVDRKSCHIDLVPENFIESPQGRLYLIDWEYSSMNDPMWDLAALFLESEFTSQEEETFLSHYESDQTPVSH---EKIAIYKILQDTIWSLWTVYKEEQGEDFGDYG-VNRYQRAVKGLAS---


General information:
TITO was launched using:
RESULT:

Template: 4R7B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1209 -7308 -6.04 -28.00
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -6.04
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.412

(partial model without unconserved sides chains):
PDB file : Tito_4R7B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4r7b-query.scw
PDB file : Tito_Scwrl_4R7B.pdb: