Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASDRQDLSDRIARAIGHGVRRLSPLSGGCVGDVLRAELEDGAAPVVVKVAD-DA---GGGLDIEGWMLRYLADTSRLPVPGVLHAEAGLLVMEEIQAGGGGISASCQEHAADLLADLHSVTWDAFGLERDTLIGGLHQPNPREASWRTFFRDHRLLYMADESHRAGRLPADVRRKVDTLAGRLDDWIEEPDAPALIHGDMWTGNVLCDGGRIAGFIDPAIYYGDAEIELAFSTLFG-TFGEPFFRRYQEKRPLRPGFFEARRDLYNLYPLLVHVRLFGGSYVGSVSRTLDRFVG
3F7W Chain:A ((2-286))----VNSVAARVTELTGREVAAVAERGHSHRWHLYRVELADGT-PLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDDRTLAMEWVDERP--PTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQDDG-AVVIDPAAHGGHREADLAMLALFGLPYLDRVRDAYNEVAPLAEG-WRARIPLHQLHPLLVHVCLFGAAYRTTLVDTARAAL-


General information:
TITO was launched using:
RESULT:

Template: 3F7W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1514 -43934 -29.02 -156.91
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -29.02
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.503

(partial model without unconserved sides chains):
PDB file : Tito_3F7W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3f7w-query.scw
PDB file : Tito_Scwrl_3F7W.pdb: