Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVGETVDRIVAD-ALEAEVRSRYRPRSGSVAETVVCRLETGDGDGDEPPSRVVCKRGGASVWTGDVIEPLVLEYMTAATDLPVPRVLASGSFADGSNDPLER-----WAIYEFREGANPGPRYHKLEPTVRRRLVADAGELLGRLHG-----------------------TSALAFDRVGGLARGADDRSLRLREPDGWHAVDPGWPLTRVPVPLA-GDEDCRPVLTHGDYQPSNLLVDDDGAVT--AVLDWGNAHVT---------------HAEYALARAEAR-FVDVYAGRLPRAERKQLQ--------ELFRRTYANCAPLETGFDRRAPVYKLLWVAQSGANYLRIAREPRGRRQLRTQVRRLVE--
4OCV Chain:A ((24-378))-TNEALFDVASHFALEGTVDSIEPYGDGHINTTYLVTTD---------GPRYILQRMNTGIFPDTVNLMRNVELVTSTLKAQGKETL--DIVRTTSGDTWAEIDGGAWRVYKFIEHTMSYNLVPN--PDVFREAGRAFGDFQNFLSGFDANQLTETIAHFHDTPHRFEDFKKALAADELGRAAGCGPEIEFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGFVGELRDSITAREAELLPFSGNLLTMECGMRFLADYLEGDVYFATKYP-EHNLVRSRTQIKLVREMEQR--ADETRAIVADVMETT


General information:
TITO was launched using:
RESULT:

Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1369 12381 9.04 41.69
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : 9.04
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.271

(partial model without unconserved sides chains):
PDB file : Tito_4OCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ocv-query.scw
PDB file : Tito_Scwrl_4OCV.pdb: