Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MFARDALSTAVETACDPDP-AVDTISTIEAGNNHTYRVTLADGTDLFLKVGTRFPDAFPAEPATMRRVRAETDLPVPRVHGTGTDPLEYPYAVYEYVPDCEAEWAGDLSHEAAERLCREAGRHLCELHQITFPQFGRIGLDTDASADDTLVADAPDADALTVVDPTPFDDLLRQSLDRQVTELADSPFDTRRDSLEAFGTDLIDRSD---FADVTPALVHGDYRLGNLCVDPSAEQITAAVLDWELPTALDPLWDAVMAQSLLTAGHRLDPDSRQTLRRAFWEAYGTSTADTPRRRCYELLARIRLARHLDTEC--RGLSEAARRARITDHHEAF--DALLVDR----
3I1A Chain:A ((3-330))KQPIQAQQLIELLKVHYGIDIHTAQFIQGGADTNAFAYQAD-SESKSYFIKLKYGYHDEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAPNGF--TQNLTGKQWKQLGKVLRQIHETSVPISIQQQLRKE-----------IYSPKWREIVRSFYNQIEFDNSDDKLTAAFKSFFNQNSAAIHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVG---NEESIYIIDWDEPMLAPKERDLMF----IGGGVG-NVWNKPHEIQYFYEGYGEINVDKTILSYYRHERIVEDIAVYGQDLLSRNQNNQSRLESFKYFKEMFDPNNVVEIAFATE


General information:
TITO was launched using:
RESULT:

Template: 3I1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1417 33865 23.90 107.85
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 23.90
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.339

(partial model without unconserved sides chains):
PDB file : Tito_3I1A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3i1a-query.scw
PDB file : Tito_Scwrl_3I1A.pdb: