Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDTATADIIAGLRAAGL-----TG--E--GEVVLEPLTGGVSCDVWRVDGPAGPIVVKRPLEQLRVAAE-WHAPVERGASEVRWLRRARGVDPHLVPEVLAELP-GHGFAMRFLPD-CPVWKDELIAGRVDPAFAAAVGRGIVAVHAATANSAAD-------RDAFP---------TDAMFR--ALRVDPFLLFV-AQK---------DAELASALYALADDLSSRKVALVHGDVSPKNILVGADGPVFLDAECAVYGDPAFDLAFCTTHLLLKAVWLG--H--------------ERLGEAAAALVEAYRAGIDWE----------------------DA---DALALRAGKLTAALLLARVEG---KSPAPYLTDPHHKQIVRDQAR----ALLLA---PTPIDALVANWKRTKE
2PYW Chain:A ((9-418))---LNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLEPPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRRAVTEFCGNVELCRLTEQVVFSDPYRV-STFNRWTSPYLDDDAKAVREDSALKLEIAELKSMFCERAQALIHGDLHTGSVMVTQDSTQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLFNKRFIALWDQNKDGPGEAYLADIYNNTEVLKFVQENYMRNLLHDSLGFGAAKMIRRIVGVAHVEDFESIEEDKRRAICERSALEFAKMLLKERRKFKSIGEVVSAIQQ---


General information:
TITO was launched using:
RESULT:

Template: 2PYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1466 -38479 -26.25 -120.62
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -26.25
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_2PYW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2pyw-query.scw
PDB file : Tito_Scwrl_2PYW.pdb: