Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence -----MEMRGGDLEAAALALWPDLARQMGEEA--GLWRAAPLARREDARVAR-------VLLRLDGPEG--------RRLVLKHQARPVVPDKFADGIAAHVAVQEVWPEGL-PVLQAVDLERQACVMEYLPARPLSVLLEGAPLETQAALLRRAGAWMDGFHRALHGEARVFQPKFTIHFLRSVMGELR---AGERRVAEPER-------FLVCAEALCAMQPDFEGQETVTAQTHGDLHQRNLVLDETRCWGVDFAGGRVVPVGHDIARLLTDYAILHAPKEA---IPKGQVLP-----PQAQSAFFEGYGLVGPGDPS----------VQLLLRNRVLAEWWGL------------PAREAERSRAQARRFGRLMALVDRVFG 1NW1 Chain:A ((32-426)) GMKELLSTMDLDTDANTIPELKERAHMLCARFLGGAWKTVP---LEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSE---RHLGPKLYGIFSG--GRLEEYIPSRPLSC----HEIS-LAHMSTKIAKRVAKVHQLEVPIWK--EPDYLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPKR-LVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQGNTRENELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVELSPVGFGFADYGRDRLSLYFKHKQLLKNLA-----

General information: TITO was launched using: RESULT: Template: 1NW1.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1266 -813 -0.64 -2.69 target 2D structure prediction score : 0.65 Monomeric hydrophicity matching model chain A : 0.65 3D Compatibility (PKB) : -0.64 2D Compatibility (Sec. Struct. Predict.) : 0.65 1D Compatibility (Hydrophobicity) : 0.65 QMean score : 0.327

(partial model without unconserved sides chains): PDB file : Tito_1NW1.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1nw1-query.scw PDB file : Tito_Scwrl_1NW1.pdb: