Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSALDEVEKVLWDHYGLRGPFEVTALAAEGRNNSLVAFRSPGGAFVWKQGSSALAPVQQREFALLAWLAEQDLPFRMAAPLRTLAGAWGWEGGRGLNVLLPLLPGERLPE-TADAWHALGTALNALHAALARFPLEGAPR--LLDWAKLGDLHPRVPDPLALSFEQPDLWGDEATLHSWRLAFGEMLWRVRDAYAALPHQVVHGDFNSVNVLFGGGGVSAVLDFEFACPGPRLLDVATALSEVLVRP--EPEWALAQAFLRGYGQ---LTLQERAALPAALLLRQAAVGVWGLGLALEDGPNATTQARLRELGTVSAWLKTQGDRLSTG
2PPQ Chain:A ((9-281))----EDELRNFLTQYDVGSLTSYKGIA-E---NSNFLLHTTKDPLILTLYEK--KNDLPFFLGLMQHLAAKGLS--CPLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWD---KSEERADE-----VEKGLREE-----IRPEIDYLAAHWP-KDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACNDLLAYDVSICLNAWCFEKDGAYNVTKGKALLEGYQSVRPLSEAELEALPLLS--RGSALRFFLTRL----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PPQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1169 -72183 -61.75 -278.70
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -61.75
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.343

(partial model without unconserved sides chains):
PDB file : Tito_2PPQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ppq-query.scw
PDB file : Tito_Scwrl_2PPQ.pdb: