Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIGRPCEIQLLASGQSNQTLRLRTD---------TEDYVLKRWRYEQVFAVDRELEVSIQKELAQQALAPEVLAYDAKQGWFLQPYYQAPSLQQVTLSPLI-KATVLAETLSKIHNTRVDIPA--WSMSERVEHYLQQLRSV-N-------SA-------VAAQMSQKLVPMQPLLEDWLSYPVLCHNDLSMNHILMADPIRIIDWEYAGIGHPLFDIASAIVVNEL------------------SDQASVRLITEYEKI-AH---------YQIDRQRLAQWCEFVEWLNKVWQHLFRHLS
1NW1 Chain:B ((74-397))---EHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-TESHLVAESVIFTLLSERHLGPKLYGIFSG--GRLEEYIPSRPLSCHEI-SLAHMSTKIAKRVAKVHQLEVPIWKEPDYLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPKRLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQGNTRENELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVEL-


General information:
TITO was launched using:
RESULT:

Template: 1NW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 924 -7339 -7.94 -30.71
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : -7.94
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.493

(partial model without unconserved sides chains):
PDB file : Tito_1NW1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1nw1-query.scw
PDB file : Tito_Scwrl_1NW1.pdb: