Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDTRQALEKDVRDNLLLLYDFDKDYDVKLLKYSENVIFKITFKEAFPVVLRIHRPGYHNIEELEGEILWMDEIHRDTDVELPVVYRGRDGRFLQKMTTF-SGEEVYVSVISFLEGSPLGELKDDELIKGLESLGEITAKLHMQSINRDKSVVIKRFYWDINNLFGDNNDGIWGSWRDYKALTKEQYRILEKCTSVMKDKLNYYGRSNEKFGLIHADLHFYNVINNN----GVNQIIDFDDSGYGFYMYDMGCALVTY--SRNLTKLEGAWVRGYEKVKKLSDEDKKFIPMFVLLRRITRLAWLATHSDSDTAKTVDDEYLDVTIDMAKEWLKANTKVAVITGAAGGIGYGIAKKFLESCK
6EF6 Chain:A ((27-351))--------DVTIAQQALTHYDVSDNASLRLLNLSENATYLVEDGE-HQSILRVHRQDYHQPHEIESELDWLAALRTDSDVTVPTVVPARDGRRVVTVDPAD--VPRHVVHFEMVGGAEPDEES-LT-LDDFQTLGRITASLHEHSQRWTRPAGFGRFSWDWEHCLGDT--PRWGRWQDAEGVGASETALLTRAQDLLHRKLEEYGSGPDRYGLIHADLRLANLLVDSSTPQRTITVIDFDDCGFGWYFYDFGTAVSFIEHDPRLGEWQESWVAGYRSRRELPAADEAMLPSFVFLRRLLLLAWMGSHTHSRESATKAISYAAGSCALAERYLSSDGL------------------------


General information:
TITO was launched using:
RESULT:

Template: 6EF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1601 -60534 -37.81 -192.17
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -37.81
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.507

(partial model without unconserved sides chains):
PDB file : Tito_6EF6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-6ef6-query.scw
PDB file : Tito_Scwrl_6EF6.pdb: