Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDDATLARSLPALLADLWG-LEDVDVRPLGGGMNSATCLVTATGG-------DRFVAKWSSDAE--------SLEAGCSAATLLGRQG------VRTGEPVGSTAGAPVVAMAGGALALLRHVP-----GRELDGDSGHEQQLIGTALATAHTAGCPASDTGPFMSEW--LYPAEDVLAVATWLPPALAEIRREYNALPQLTWTQLHTDPAPE----AFIHDD---------ATGSTGLIDWAGSRRGPALYDVASAVMYLGGPQQ---------------AEQFLSSYADRGPVENDELALLDIFRRFRWAIQASYFAGRIVADDRTGIVDDTDHNTEALARARRGLAEAR
3ATS Chain:A ((1-357))TLPAVISRWLSSVLPGGAAPEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTDTTLHRHFNWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALTGVELGDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYHAGLMKHLLGEEH


General information:
TITO was launched using:
RESULT:

Template: 3ATS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1322 9354 7.08 31.71
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 7.08
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.287

(partial model without unconserved sides chains):
PDB file : Tito_3ATS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ats-query.scw
PDB file : Tito_Scwrl_3ATS.pdb: