@TOME V3
(Feb 2022)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : B51_114800T0_kcl103: (2019-03-28 )
NTFNNCEVSVRDKSGTEVAHACIKAGGSKNVGGAVVSTSNKCVVSTT
Atome Classification :
(20 SA)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....-...-.10.----.-...-----...-----20.....------...----30-.-----...-----..--..-.40-.......
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NTFNN-
C
E
V
-
S
V
RD----K-SG
T
-----
E
V
A
-----
H
A
C
I
KAG------GSK----N--V-----
G
G
A
-----
V
V--ST-S
N
--
K
C
V
V
STT
2
Fugue
100.00
25%
0
- C- -
-
3J5P
-
TRPV1_RAT
A:
[111-729]
-------------------------------------------------------LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQ
N
S
W
Q
P
-
A
D
I
-
S
A
R
D
----
S
-
V
G
N
-----
T
V
L
-----
H
A
L
V
E
V
A
------
D
N
--------------------------
T
V
-
D
N
--
T
K
F
V
T
S
M
14
Fugue
66.55
20%
-102
- C8 -
-
2MM2
-
?
A:
[1-65]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
-
C
T
A
-
N
I
L
N
----
I
-
N
E
V
-----
V
I
A
-----
T
G
C
V
P
A
G
------
G
N
L
----
I
--
I
-----
R
V
G
SDHSY
L
I
--
R
A
-
T
V
--
S
C
G
L
S
L
N
3
Fugue
65.45
21%
48
- C9 -
0.33
1TI5
-
?
A:
[1-46]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
T
-
C
M
I
-
K
K
E
G
WGKC
L
-
I
D
T
-----
T
C
A
-----
H
S
C
K
N
R
G
------
Y
---------
I
-----
G
G
N
-----
C
K
--
G
M
-
T
R
--
T
C
Y
C
L
V
N
24
SP3
65.38
19%
68
- C9 -
-
1GPS
-
?
?:
[1-47]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KICRRRS
A
G
F
K
G
P
C
-----------
M
-
S
N
K
-----
N
C
A
-----
Q
V
C
Q
Q
E
G
------
W
G
--------------
G
G
N
-----
C
D
--
G
P
-
F
R
--
R
C
K
C
I
R
Q
11
Fugue
63.92
20%
0
- C- -
-
1FJG
-
RS11_THET8
K:
[11-129]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRQVASGRAYIH
A
S
Y
N
N
-
T
I
V
-
T
I
T
D
----
P
-
D
G
N
-----
P
I
T
-----
W
S
---
S
G
------
G
V
I
----
G
--
Y
-----
K
G
S
-----
R
K
--
G
T
-
P
Y
--
A
A
Q
L
A
A
L
27
HHSearch
63.45
22%
-34
- C8 -
-
2MM0
-
?
A:
[1-46]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
-
C
V
A
-
N
I
L
N
----
I
-
N
E
A
-----
V
I
A
-----
T
G
C
V
P
A
G
------
G
E
L
----
R
--
I
FVGSS
H
S
Y
-----
L
I
--
K
A
-
T
S
--
S
C
G
L
S
--
22
SP3
58.18
19%
117
- C9 -
-
1MYN
-
?
?:
[1-44]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DCLS
G
R
Y
K
G
P
C
A
V
---------
W
-
D
N
E
-----
T
C
R
-----
R
V
C
K
E
E
G
------
R
S
---------------
S
G
-----
H
C
--
S
P
-
S
L
--
K
C
W
C
E
G
C
5
Fugue
58.00
21%
102
- C9 -
0.37
5LJ3
-
?
H:
[11-481]
IKFQRENWEMIRSHVSPIISNLTMDNLQESHRDLFQVNILIGRDIICKNVVDFTLNNGRLIPALSALIALLNSDIPDIGETLAKELMLMFVQQFNRKDYVSCGNILQCLSILFLYDVIHEIVILQILLLLLEKNSLRLVIAVMKICGWKLALVSKKTHDMIWEKLRYILQTQELSSTLRESLETLFEIRQKDYKSCENFNELTMAFDTLRQKLV
E
F
K
K
K
-
I
Y
L
-
V
L
K
S
----
S
L
S
G
D
-----
E
A
A
-----
H
K
L
L
K
L
K
------
I
A
N
----
N
--
L
-----
K
K
S
-----
V
V
--
D
I
-
I
I
--
K
S
S
L
Q
E
S
18
SP3
56.99
17%
-162
- C9 -
-
1SCO
-
?
?:
[1-38]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
-
V
I
I
-
N
V
K
C
----
K
-
I
S
R
-----
Q
C
L
-----
E
P
C
K
K
A
G
------
M
----------------
R
F
-----
G
K
--
C
M
-
N
G
--
K
C
H
C
T
P
K
17
SP3
55.95
19%
6
- C9 -
-
1AYJ
-
?
?:
[2-51]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
L
-
C
E
R
-
P
S
G
T
----
W
-
S
G
V
CGNNN
A
C
K
-----
N
Q
C
I
N
L
E
------
K
A
R
----
H
--
G
-----
S
C
N
-----
Y
V
--
F
P
-
A
H
--
K
C
I
C
Y
F
P
20
SP3
53.16
21%
-105
- C9 -
-
1ICA
-
?
?:
[1-40]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
T
-
C
D
L
L
S
G
T
G
----
I
-
N
H
S
-----
A
C
A
-----
A
H
C
L
L
R
G
-------------
N
--
R
-----
G
G
------
Y
C
--
N
G
-
K
G
--
V
C
V
C
R
N
-
21
SP3
52.69
19%
-56
* C8 *
-
1H9R
-
MODE_ECOLI
A:
[78-139]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNQLPGIISHIE
R
G
A
E
Q
-
C
E
V
-
L
M
A
L
----
P
-
D
G
Q
-----
T
L
C
------
A
T
V
P
V
N
------
E
A
T
----
S
LQ
Q
-----
G
Q
N
-----
V
T
--
A
Y
-
F
N
AD
S
V
I
I
A
T
L
16
Fugue
52.30
17%
29
- C9 -
0.23
2BNK
-
GP167_BPPH2
A:
[65-128]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
N
L
S
A
-
C
E
V
-
A
V
L
D
LYE-
Q
-
S
N
I
-----
R
I
P
-----
S
D
I
I
E
D
L
VNQRLQ
S
E
Q
----
E
--
V
-----
L
N
Y
-----
I
E
--
T
Q
-
R
T
--
Y
W
K
L
E
N
Q
25
SP3
48.77
19%
-23
- C9 -
0.34
1I2U
-
DEFN_HELVI
A:
[1-44]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D
K
L
I
G
S
-
C
V
W
-
G
A
V
N
----
Y
-
T
-
S
-----
D
C
N
-----
G
E
C
K
R
R
G
------
Y
K
--------------
G
G
H
-----
C
G
--
S
F
-
A
N
V-
N
C
W
C
E
T
-
26
SP3
47.40
14%
-1
- C9 -
-
1BHP
2
?
?:
[1-45]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
S
-
C
C
K
S
----
T
-
L
G
R
-----
N
C
Y
-----
N
L
C
-
R
A
R
------
G
A
Q
KLCA
N
--
V
-----
C
R
C
-----
K
L
--
T
S
-
G
L
--
S
C
P
K
D
F
P
1
Fugue
47.25
21%
27
- C9 -
0.27
2PNN
1
TRPV1_RAT
A:
[11-258]
-------------------------------------------------------LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQ
N
S
W
Q
P
-
A
D
I
-
S
A
R
D
----
S
-
V
G
N
-----
T
V
L
-----
H
A
L
V
E
V
A
------
D
N
T
----
V
--
D
-----
N
T
K
-----
F
V
--
T
S
M
Y
N
--
E
I
L
I
L
G
A
12
Fugue
41.59
17%
52
* C10 *
-
2JTM
-
CREN7_SULSO
A:
[1-60]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
S
S
G
K
-
K
P
V
-
K
V
K
T
----
P
-
A
G
K
-----
E
A
E
LVPEK
V
W
A
L
A
P
K
------
G
R
K
----
G
--
V
-----
K
I
G
-----
L
F
KD
P
E
-
T
G
--
K
Y
F
R
H
K
L
15
Fugue
39.13
17%
-43
- C9 -
0.28
1MM0
-
TERN_PSEUS
A:
[1-36]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
C
N
F
Q
S
-
C
W
A
-
T
C
Q
A
----
Q
-
H
S
I
-----
Y
F
R
-----
R
A
F
C
D
------------------------------------
R
S
-
Q
C
--
K
C
V
F
V
R
G
10
Fugue
38.82
19%
-142
- C9 -
0.31
2CMY
-
TI_VERHE
B:
[7-29]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
K
V
-
M
C
Y
A
----
Q
-
R
S
P
-----
E
L
L
-----
R
R
C
L
D
N
C
------------------------------------------------
9
Fugue
36.63
25%
80
- C9 -
0.24
1RH5
-
SECG_METJA
C:
[21-52]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
T
F
S
K
-
I
R
V
-
K
P
E
H
----
V
-
I
G
V
-----
T
V
A
-----
F
V
I
I
E
A
I
------
L
T
Y
----
G
--
R
-----
F
-------------------------