@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : BN0119_118150T0_kcl89: (2019-03-28 )
RDCRLYYCWGPGSDNRRVVGTVDKGGSLKDYVNGETITVKAGKDCKAEIIGGKVEEGYFYEGF
Atome Classification :
(20 SA)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.......-..10--.....--.-...20..---.------..----------------.-----...-------30-.-...-----..-------..40--..-...--.--...50---...--..-..---.----.60..
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RD
C
R
L
Y
Y
-
C
WG---PGSDN--
R
-
R
V
V
G
-
T
V---D------KG----------------G-----SLK-------DY-V-NG
E
-----
T
I
-------
T
V
K---AG-KD
C
--
K
--
A
E
II----GGK--VE-EG---Y----FYEGF
23
Fugue
73.13
24%
67
- C6 -
0.57
2MYW
-
?
A:
[7-85]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGRENLYFQGHMAAPA
R
F
C
V
Y
Y
D
---
G
---
H
L
P
A
T
--
R
-
V
L
L
M
-
Y
V
---
R
------
I
G
----------------
T
-----
T
A
T
-------
I
T
-
A
-
R
G
H
-----
E
F
-------
E
V
E
---
A
K
D
Q
N
C
--
K
--
V
I
L
T
----
N
G
K
Q-
A
P
-
D
W
---
L
----
A
A
E
P
Y
30
Fugue
69.64
18%
80
- C6 -
0.46
5A6W
4
?
C:
[11-93]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAIDLSRERDPNFFDHPGIPV
P
E
C
F
W
F
M
-
F
K
N
------
N
V
--
R
-
Q
D
A
G
-
T
C
---
Y
------
S
S
----------------
W
-----
K
M
D
-------
M
K
-
V
-
G
P
N
-----
W
V
-------
H
I
K
---
S
D
-
D
N
C
NL
S
--
G
D
F
P
----
P
G
W
--
I
V
-
L
G
---
K
----
K
R
P
G
F
35
Fugue
66.26
28%
-
- C6 -
0.30
2COV
-
3XYN_ALCSP
D:
[378-469]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP
E
N
C
Q
D
D
F
-
N
F
N
---
Y
V
S
D
Q
--
E
-
I
E
V
Y
-
H
V
---
D
------
K
G
WSAGWNYVCLNDYCLP
G
-----
N
K
S
-------
N
G
-
A
-
F
R
K
-----
T
F
-------
N
A
V
---
L
G
-
Q
D
Y
--
K
--
L
T
F
-------
K
--
V
E
-
D
R
---
Y
----
G
Q
G
Q
Q
37
Fugue
65.13
25%
-5
- C6 -
0.33
2LU7
-
A:
[1-82]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
T
R
V
R
S
---
T
---
P
G
G
D
L
--
E
-
L
V
V
H
-
L
S
---
G
------
P
G
----------------
G
-----
P
V
R
-------
W
Y
-
K
-
D
G
E
-----
R
L
ASQGRVQ
L
E
Q
---
A
G
-
A
R
Q
--
V
--
L
R
V
Q
----
G
A
R
--
S
G
-
D
A
---
G
----
E
Y
L
C
D
27
Fugue
62.25
19%
-56
- C8 -
-
1QYS
-
?
A:
[3-94]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
I
Q
V
Q
V
-
N
I
D
---
D
N
G
K
N
--
F
-
D
Y
T
Y
-
T
V
---
T
------
T
E
----------------
S
-----
E
L
Q
KVLNELM
D
Y
-
I
-
K
K
Q
GAKRV
R
I
-------
S
I
T
---
A
R
-
T
K
K
--
E
--
A
E
K
F
----
A
A
I
--
L
I
-
K
V
---
F
----
A
E
L
G
Y
40
SP3
55.71
17%
14
* C6 *
0.44
1H9R
-
MODE_ECOLI
A:
[78-139]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
N
Q
L
P
G
-
I
I
S
HIE
R
G
A
E
Q
--
C
-
E
V
L
M
-
A
L
---
P
------
D
G
----------------
Q
-----
T
L
C
-------
A
T
-
V
P
V
N
E
-----
A
T
-------
S
L
Q
---
Q
G
-
Q
N
V
--
T
--
A
Y
F
N
----
A
D
S
--
V
I
-
I
A
---
T
----
L
----
1
PsiBlast_PDB
54.27
48%
0
- C- -
-
1QFX
1
PHYB_ASPAW
A:
[273-299]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
L
N
Y
Y
Y
-
C
A
G
---
P
G
D
K
N
--
M
-
A
A
V
G
-
A
V
---
Y
------
A
N
----------------
A
-----
S
L
------------------------------------------------------------------------------
29
Fugue
51.14
28%
-78
- C8 -
-
2LVH
-
Y059A_AFV1Y
A:
[7-50]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
E
R
V
Y
Q
-
C
L
R
---
C
G
L
T
F
--
R
-----------
T
------
K
K
----------------
Q
-----
L
I
R
-------
H
L
-
V
-
N
T
E
-----
K
V
-------
N
--------------------------
P
--
L
S
-
I
D
---
Y
----
Y
Y
Q
S
F
28
Fugue
50.18
23%
26
- C6 -
0.11
2YVS
-
?
A:
[1-219]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEVHAADQYLVAPGEADLLEVHARL
A
G
T
G
L
F
P
-
P
F
P
---
P
V
E
L
P
--
G
-
G
V
G
G
-
L
V
---
A
------
R
G
----------------
G
FAQTF
F
F
P
-------
A
E
-
V
-
L
G
L
-----
T
F
-------
R
T
P
---
K
G
-
R
R
V
--
R
--
A
G
G
V
----
V
V
K
--
N
V
-
Q
G
---
Y
----
D
L
V
R
L
34
Fugue
48.45
23%
108
* C8 *
-
4NUZ
-
?
A:
[1-892]
MKIPEKIPMKPLHGPLYGGYFRTWHDKTSDPTEKDKVNSMGELPKEVDLAFIFHDWTKDYSLFWKELATKHVPKLNKQGTRVIRTIPWRFLAGGDNSGIAEDTSKYPNTPEGNKALAKAIVDEYVYKYNLDGLDVQVEHDSIPKVDKKEDTAGVERSIQVFEEIGKLIGPKGVDKSRLFIMDSTYMADKNPLIERGAPYINLLLVQVYGSQGEKGGWEPVSNRPEKTMEERWQGYSKYIRPEQYMIGFSFYEENAQEGNLWYDINSRKDEDKANGINTDITGTRAERYARWQPKTGGVKGGIFSYAIDRDGVAHQPKKYAKKDATDNIFHSDYSVSKALKTVMLKDKSYDLIDEKDFPDKALREAVMAQVGTRKGDLERFNGTLRLDNPAIQSLEGLNKFKKLAQLDLIGLSRITKLDRSVLPANMKPGKDTLETVLETYKKDNKEEPATIPPVSLKVSGLTGLKELDLSGFDRETLAGLDAATLTSLEKVDISGNKLDLAPGTENRQIFDTMLSTISNHVGSNEQTVKFDKQKPTGHYPDTYGKTSLRLPVANEK
V
D
L
Q
S
Q
L
-
L
F
G
---
T
V
T
N
Q
--
G
-
T
L
I
N
-
S
------------
E
----------------
A
-----
D
Y
K
-------
A
Y
-
Q
-
N
----------------------------------
H
K
I
----
A
G
R
SF
V
D
-
S
N
---
Y
----
H
Y
N
N
F
33
Fugue
47.56
17%
68
- C6 -
0.19
4OIF
12
?
A:
[2-686]
-PKYERTYTTQANFILHGGDYNPDQWLDRPDILQADLELMKLSHTNTFTVGVFAWSALEPEEGVYRFEWLDKVFDDIYRIGGRVILATPSGARPAWLSQKYPEVLRVNAARVRQLHGGRHNHCFTSSVYREKTQHINRLLAERYGDHPALLMWHVSNEYGGECHCNLCQEAFREWLKKKYNHDLDALNAAWWTSFWSHTYTDWSQIESPSPIGEHTIHGLNLDWKRFVTDQTISFFENEIVPLRELTPHIPITTNFMADTHDLIPFQGLDYSKFAKHLDVISWDAYPAWHNDWESTADLAMKVGFINDLYRSLKQQPFLLMECTPSLVNWHKVNKAKRPGMHFLSSMQMIAHGSDSILYFQWRKSRGSFEKFHGAVVDHDNRTDSRVFQEVAEVGKALKKMSGIVGTNRPAEVAILYDWENNWALNDAQGFAAETKRYPQTLVQHYRPFWERDIPVDVITKEHDFSRYKLLIAPMLYLVSEETIARLKEFVANGGTLVMTYISGIVDEHDLAYLGGWHQDLREMFGMEPIETDTLYPRDRNSVHYRGRSYELKDYA
T
V
I
K
I
H
A
-
A
--------------
T
V
E
G
-
V
Y
---
E
------
D
D
--------------------------------
F
Y
-
A
-
D
T
P
-----
A
V
-------
T
S
N
---
Q
Y
-
G
K
G
--
Q
--
A
Y
Y
I
----
G
G
R
--
L
E
-
D
Q
---
F
----
H
R
D
F
Y
41
SP3
47.24
15%
54
- C6 -
0.25
1YEZ
-
?
A:
[1-68]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MF
R
E
E
S
R
S
----
V
---
P
V
E
E
G
--
E
-
V
Y
D
V
-
T
I
QDI
A
------
R
Q
----------------
G
-----
D
G
I
-------
A
R
-
I
-
E
G
F
-----
V
I
-------
F
V
P
GTK
V
G
-
D
E
V
--
R
--
I
K
V
E
------
R
--
V
L
-
P
K
---
F
AFAS
V
V
E
--
42
SP3
46.36
22%
54
- C6 -
-
1BDO
1
?
?:
[1-80]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EISGHIVRSP
M
V
G
T
F
Y
R
-
T
P
S
---
P
D
A
K
A
--
F
-
I
E
V
G
Q
K
V
---
N
------
V
G
----------------
D
-----
T
L
C
-------
I
V
E
A
-
M
K
M
-----
M
N
-------
Q
I
E
---
A
D
-
K
S
G
--
T
--
V
K
A
I
LVES
G
Q
P
--
V
E
-
F
D
EPL
V
----
V
I
E
--
46
SP3
44.08
15%
50
- C9 -
-
1WAP
2
MTRB_BACSU
A:
[8-75]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DFVVIKAV
E
D
G
V
N
V
I
-
G
L
T
---
R
G
T
D
T
--
K
F
H
H
S
E
-
K
L
---
D
------
K
G
----------------
E
-----
V
I
I
-------
A
Q
-
F
-
T
E
H
-----
T
S
-------
A
I
K
---
V
R
-
G
E
A
--
L
--
I
Q
T
A
----
Y
G
E
--
M
K
S
E
K
---
K
---------
38
Fugue
42.73
17%
117
* C9 *
-
4Q6O
5
?
A:
[21-437]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHYSVLKGLVEVVPVLNKPSMLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSIDAVLHLHDGGGYYRPVYVDAMLNPKRWGNCFIIDQDEVKGAKFPNLLAFANNTIESINAHLLHPIEEYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKELPLASRVFYHLQAIEGLLNQLNIPFKRDFDLNPNSVHALINDKNLWAKISSLPKMPLFNLRPKLNHFPLPHNTKIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDPSL
E
E
V
K
M
Q
I
----------
D
N
--
K
-
D
Q
M
V
-
K
I
---
G
------
S
V
----------------
V
-----
E
V
K
--------------
E
-----
S
F
-------
Y
I
H
---
A
M
-
D
N
I
--
R
--
A
N
V
I
----
G
F
S
--
V
S
-
N
E
---
N
----
K
P
N
E
A
31
Fugue
42.21
17%
-45
- C8 -
-
5TC1
-
MATA_BPMS2
M:
[1-393]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRAFSTLDRENETFVYRSNWTPGRFNSTGAKTKQWHYPSPYSRGALSVTSIFS
L
D
A
R
S
C
Y
-
S
L
F
---
P
V
S
Q
N
--
L
-
T
Y
I
E
-
V
---------------------------------------------------
P
Q
-----
N
V
-------
A
N
R
---
A
S
-
T
E
V
--
L
--
Q
K
V
T
----
Q
G
N
--
F
N
-
L
G
---
V
----
A
L
A
E
A
2
HHSearch
40.34
53%
-277
- C5 -
-
5JI4
-
?
A:
[7-21]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
-
N
G
E
-----
T
Y
-------
T
V
S
---
S
S
-
E
E
C
--
E
---------------------------------
44
SP3
38.96
14%
-1
- C6 -
1OAC
-
AMO_ECOLI
A:
[5-88]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AHMVPMDKTLKE
F
G
A
D
V
Q
W
-
D
-------
D
Y
A
--
Q
-
L
F
T
L
-
I
K
---
D
GAYVKV
K
P
----------------
G
-----
A
Q
T
-------
A
I
-
V
-
N
G
Q
-----
P
L
-------
A
L
--------
Q
V
--
P
--
V
V
M
K
----
D
N
K
AW
V
S
-
D
T
---
F
----
I
N
D
V
F
15
HHSearch
38.18
33%
26
* C14 *
-
2GE5
-
T2E5_ECOLX
B:
[179-205]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
---
A
G
S
G
N
--
T
-
T
N
I
G
-
S
I
---
H
------
A
H
-----------------------
Y
K
-------
D
F
-
V
-
E
G
K
-----
G
I
-------
F
-----------------------------------------------
47
SP3
37.84
23%
143
- C6 -
-
1YUA
-
?
?:
[66-122]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
K
L
R
Y
L
A
D
A
---
P
Q
Q
D
P
EG
N
-
K
T
M
V
-
R
F
---
S
------
R
K
----------------
T
-----
K
-
Q
-------
Q
Y
-
V
-
S
S
E
----------------
K
---
D
G
-
K
A
T
--
G
WS
A
F
Y
V
----
D
G
K
--
W
V
-
E
G
---
K
----
K
----