@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : IR0013_113640T0_kcl56: (2019-03-29 )
KHKCFIDIWKQEGDWTRGRESLYLSVAKNPGESYWFKQGLLGASFTLITIDDDCDASLRFGKMPPRFFFEGR
Atome Classification :
(20 SA)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------........--.10--.---..-.--------..---.---..20----.---------....---...-.30----.-.------.--..---..---------.40----.-----.....--..-------50.------.----.-.---...----------.60.--..---.-.--.-..70-.
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KH
K
C
F
I
D
I
--WK---Q---EG-D--------WT---R---GR
E
-----
S
---------
L
Y
L
S
---
V
AK-NPG----E-
S
------
Y
--
W
F
---KQ---------GLL----G-----A
S
F
T
L
--
I
T
-------IDD------D----C-D---ASL----------RFGK--M
P
---
P
-
R
--F-FFEG-R
25
Fugue
69.44
24%
67
- C14 -
-
5A6W
4
?
C:
[11-93]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
A
I
D
L
--
S
R
---
E
---
R
D
P
N
--------
F
F
---
D
---
H
P
G
-----
I
PVPECFWFM
F
K
N
N
---
V
R
Q
-
D
A
G
----
T
-
C
------
Y
SS
W
K
---
M
D
---------
M
K
V
----
G
-----
P
N
W
V
H
--
I
K
-------
S
D
D
------
N
----
C
-
N
---
L
S
-------------
G
D
--
F
P
---
P
-
G
--
W
-
I
V
L
G
-
K
33
Fugue
62.46
25%
-53
- C8 -
0.19
4G6V
-
CDII2_BURP2
B:
[2-104]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AI
D
L
F
C
Y
L
S
I
DR
G
A
---
A
---
E
S
-
D
--------
L
N
---
K
---
I
R
S
-----
N
HSELFEGK-
F
L
I
S
PVR
D
A
D
-
F
S
L
----
K
-
E
------
I
--
A
A
---
E
H
---------
G
L
V
----
A
-----
E
S
F
F
L
--
V
S
-------
L
N
D
------
K
----
N
-
S
---
A
D
L
IP--------
I
V
S
K
--
I
L
---
V
-
D
--
G
-
F
N
G
G
-
A
34
Fugue
59.88
24%
-16
- C8 -
0.09
3C5W
-
PPME1_HUMAN
P:
[39-376]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RDFSPVPWSQYFESMEDVEVENETGKDTFRVYKSGSEGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHAMGGAIAVHTASSNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQIRNLESARVSMVGQVKQCKPYT
W
R
I
E
L
A
K
T
--
E
K
---
Y
---
W
D
-
G
--------
W
F
---
R
---
G
L
S
-----
N
---------
L
F
L
S
---
C
P
I
-
P
------------------------------------------------
K
L
L
L
--
L
A
-------
G
V
D
------
R
----
L
-
D
---
K
D
L
----------
T
I
G
Q
--
M
Q
---
G
-
K
--
F
-
Q
M
Q
V
-
L
26
Fugue
57.64
20%
20
* C10 *
-
2FOK
-
T2F1_PLAOK
A:
[287-386]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V
P
K
R
V
Y
W
E
M
--
L
A
---
T
NLT
D
K
-
E
--------
Y
V
---
R
---
T
R
R
-----
A
---------
L
I
L
E
---
I
L
I
-
K
A
G
SLKI
E
-
Q
------
I
--
Q
D
---
N
L
---------
K
K
L
----
G
-----
F
D
E
V
I
--
E
T
-------
I
E
N
------
D
----
I
-
K
---
G
L
I
NTGIFIEIKG
R
F
Y
Q
--
L
K
DHI
L
-
Q
--
F
-
V
I
P
N
-
R
44
SP3
55.00
18%
5
* C9 *
-
1WAP
2
MTRB_BACSU
A:
[8-75]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
F
V
V
I
--
K
A
---
V
---
E
D
-
G
VNVIG---
L
T
---
R
---
G
T
D
-----
T
---------
K
F
H
H
---
S
E
K
L
D
K
G
----
E
-
V
------
I
--
I
A
---
Q
------------
F
----
T
-----
E
H
T
S
A
--
I
K
-------
V
R
G
------
E
----
A
-
L
---
I
Q
T
----------
A
Y
G
E
--
M
-----------
K
S
E
K
-
K
45
SP3
54.14
16%
44
- C8 -
0.20
1H8C
-
A:
[1-82]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NA
E
P
V
S
K
L
R
I
--
R
T
---
P
---
S
G
-
E
------------------------------------
F
L
E
---
R
R
F
-
L
A
S
----
N
-
K
LQIVFD
F
--
V
A
---
S
K
---------
G
F
P
----
W
-----
D
E
Y
K
L
--
L
S
TFPRRDV
T
Q
L
------
D
----
P
-
N
---
K
S
L
----------
L
E
V
K
--
L
F
---
P
-
Q
ET
L
-
F
L
E
A
-
K
47
SP3
53.77
23%
-3
- C11 -
-
1PZ4
1
?
A:
[4-116]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIRMSL
K
S
D
E
V
F
A
K
--
I
A
KRL
E
---
S
I
-
D
P-------
A
N
---
R
---
Q
V
E
-----
H
---------
V
Y
K
F
---
R
I
T
-
Q
G
G
----
K
-
V
------
V
KN
W
V
MDL
K
N
---------
V
K
L
----
V
ESDDA
A
E
A
T
L
--
T
M
-------
E
D
D
------
I
----
M
-
F
---
A
-
I
----------
G
T
G
A
--
L
P
---
A
K
E
--
A
-
M
A
Q
D
-
K
35
Fugue
52.22
17%
-46
- C8 -
5V0S
-
?
A:
[1-69]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
D
L
Y
V
D
V
--
L
D
---
K
---
V
G
-
A
--------
L
A
---
H
---
V
T
S
-----
I
---------
L
A
R
E
E--
I
S
I
-
T
N
L
----
Q
-
I
------
L
--
E
A
---
R
E
---------
G
L
L
----
G
-----
V
L
R
I
S
--
F
Q
-------
R
E
E
------
D
----
R
M
K
---
A
K
L
----------
A
L
G
E
--
E
K
---
Y
-
Q
--
T
-
Y
-----
43
SP3
51.50
22%
12
- C9 -
-
1F2Q
1
FCERA_HUMAN
A:
[4-85]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
P
K
V
S
L
N
-------------
P
-
P
--------
W
N
RIF
K
---
G
-
E
-----
N
---------
V
T
L
T
---
C
N
G
-
N
N
F
----
S
-
T
------
K
--
W
F
---
H
N
---------
G
S
L
SEET
N
-----
S
S
L
N
I
VN
A
K
-------
F
E
D
------
S
GEYK
C
-
Q
---
H
Q
Q
----------
V
N
E
S
--
E
P
---
V
-
Y
--
L
E
V
F
S
---
17
HHSearch
45.10
21%
-118
- C10 -
-
3DPG
-
?
A:
[15-56]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
E
R
C
I
Q
D
I
--
R
N
---
A
---------------
P
V
---
R
---
N
R
S
-----
T
---------
Q
F
Q
L
---
A
Q
Q
-
N
-
M
----
L
-
A
------
Y
--
T
F
---
G
E
---------
V
I
P
----
G
-----
F
A
S
A
---------------------------------------------------------------------
29
Fugue
44.59
16%
49
- C8 -
1B24
-
DMO1_DESMO
A:
[7-99]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSGI
S
A
Y
L
L
G
L
I
--
I
G
---
D
---
G
G
-
L
--------
Y
K
---
L
KYK
G
N
R
-----
S
---------
E
Y
R
V
---
V
I
T
-
Q
K
S
----
E
-
N
------
L
--
I
K
---
Q
H
IAPLMQFLI
D
E
L
----
N
-----
V
K
S
K
I
--
Q
I
-------
V
K
G
------
D
----
T
-
R
---
Y
E
L
----------
R
V
S
S
--
K
K
---
L
-
Y
--
Y
-
Y
F
A
N
M
L
21
HHSearch
44.58
37%
0
- C- -
-
1QP2
-
PSAE_NOSS8
A:
[13-49]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
----
E
-
S
------
Y
--
W
F
---
Q
D
-----------------------
V
G
T
V
--
A
S
-------
V
D
Q
------
S
GIK-
Y
-
P
---
V
I
V
----------
R
F
E
K
--------------------
39
Fugue
44.21
17%
45
- C8 -
-0.01
5HOK
-
?
A:
[2-84]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SH
M
N
D
V
L
V
D
A
--
Y
N
---
I
---
A
K
-
D
SQHVHGVH
Y
I
---
R
---
G
R
N
VGEDV
H
---------
L
A
I
N
---
I
Y
V
-
D
A
D
----
L
-
K
------
V
--
F
E
---
S
D
---------
L
V
A
----
D
-----
A
I
R
R
K
--
I
E
-------
A
E
V
------
D
----
H
-
V
---
R
D
V
----------
H
V
G
V
--
T
P
---
V
-
R
--
I
-
A
-----
30
Fugue
43.63
17%
-44
* C11 *
-
3WO4
2
IL18R_HUMAN
B:
[1-301]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GPESCTSRPHITVVEGEPFYLKHCSCSLAHEIETTTKSWYKSSGSQEHVELNPRSSSRIA
L
H
D
C
V
L
E
F
--
W
P
---
V
---
E
L
-
N
--------
D
T
---
G
-----------------------------------------
S
------
Y
--
F
F
---
Q
M
---------
K
N
Y
----
T
-----
Q
K
W
K
L
--
N
V
-------
I
R
R
------
N
----
K
-
H
---
S
C
F
----------
T
E
R
Q
--
V
T
---
S
-
K
--
I
-
V
E
V
K
-
K
18
HHSearch
42.78
21%
-121
- C10 -
-
3DVO
-
?
B:
[15-58]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
E
R
C
I
Q
D
I
--
R
N
---
A
---------------
P
V
---
R
---
N
R
S
-----
T
---------
Q
F
Q
L
---
A
Q
Q
-
N
-
M
----
L
-
A
------
Y
--
T
F
---
G
E
---------
V
I
P
----
G
-----
F
A
S
A
---------------------------------------------------------------------
27
Fugue
42.36
13%
-25
- C10 -
-
2MPN
-
YGAP_ECOLI
A:
[106-173]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
S
Q
P
L
P
L
--
M
R
---
Q
---
V
Q
-
I
--------
A
A
---
G
---
G
L
I
-----
L
---------
I
G
V
V
---
L
G
Y
-
T
V
N
----
S
-
G
------
F
--
F
L
---
L
S
---------
G
F
V
----
G
-----
A
G
L
L
F
--
A
G
-------
I
S
G
------
F
----
S
-
G
---
M
A
R
----------
L
L
D
K
--
M
P
----------
W
N
Q
R
-
A
40
SP3
40.06
15%
56
- C9 -
-
1CSK
-
CSK_HUMAN
A:
[11-68]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
T
E
CI---
A
---------
K
Y
N
F
---
H
G
T
-
A
E
Q
----
D
L
P
----------
F
---
C
K
----------------
G
-----
D
V
L
T
I
--
V
A
-------
V
T
K
------
D
----
P
-
N
WYK
A
K
N
----------
K
V
G
R
EG
I
I
---
P
-
A
--
N
-
Y
V
Q
K
-
R
4
HHSearch
40.00
39%
-287
- C12 -
-
6EY0
-
?
B:
[160-177]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
-
S
------
S
--
L
F
---
E
N
---------
M
P
T
----
V
-----
A
A
I
T
L
--
L
T
----------------------------------------------------------------
31
Fugue
39.57
22%
112
- C4 -
-
5KKP
1
PUS7_HUMAN
A:
[10-551]
GLTEADVGITKFVSSHQGFSGILKERYSDFVVHEIGKDGRISHLNDLSIPVPSEDIFTVLTAEEKQRTSVAIEVIEDTKEKRTIIHQAIKSLFPGLETKTEDREGKKYIVAYHWPKSRGSYCHFVLYKENKDTMDAINVLSKYLRVKPNIFSYMGTKDKRAITVQEIAVLKITAQRLAHLNKCLMNFKLGNFSYQKNPLKLGELQGNHFTVVLRNITGTDDQVQQAMNSLKEIGFINYYGMQRFGAVPTYQVGRAILQNSWTEVMDLILKPRSGKGYLVKCREEWAKTKDPTAALRKLPVKRCVEGQLLRGLSKYGMKNIVSAFGIIPRNNRLMYIHSYQSYVWNNMVSKRIEDYGLKPVPGDLVLKGATATYIEEDDVNNYSIHDVVMPLPGFDVIYP
K
H
K
I
Q
E
A
Y
--
R
E
M--
L
---
T
A
-
D
--------
N
L
---
D
---
I
D
N
M----
R
---------
H
K
I
R
---
D
Y
S
-
L
S
G
----
A
-
Y
------
R
--
K
I
---
I
I
---------
R
P
Q
----
N
-----
V
S
W
E
V
--
V
A
-------
Y
D
D
PKIPLF
N
----
T
-
D
---
V
D
N
----------
L
E
G
K
--
T
P
---
P
-
V
--
F
-
A
S
E
G
-
K
20
HHSearch
38.61
36%
-87
* C14 *
-
6FUB
-
?
B:
[63-87]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
W
V
H
--
I
K
-------
S
D
D
------
N
----
C
-
N
---
L
S
-------------
G
D
--
F
P
---
P
-
G
--
W
-
I
V
L
G
--