@TOME V3
(Feb 2022)
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : IR0088_067500T0_kcl30: (2019-03-29 )
CQWFLKNKVGNTVHTNYIKEGASQTWTVQYIPITFTVDKNCHKVTTKPDLPEGFTATA
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....-....----.10-...--.....--.-20-----...-.....-.30-.----.----.---....-.---------.40--.....-.-..50----------.......
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C
Q
W
F
-LKNK----VG--N
T
V
--
H
T
N
Y
I
--K-E------GAS-
Q
T
W
T
V
-
Q
Y
--
I
----
P
----
I
---
T
F
T
V-D---------KNC--HKVTT-K-PDLP----------EGFTATA
3
Fugue
69.95
28%
52
- C5 -
0.45
5A6W
4
?
C:
[11-93]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAIDLSRERDPNFFDHPGIPVPE
C
F
W
F
M
F
K
N
N
----
V
R
--
Q
D
A
--
G
T
C
Y
-----
S
------
S
W
K
-
M
D
M
K
V
-
G
P
--
N
----
W
----
V
---
H
I
K
S
-
D
---------
D
N
C
--
N
---
L
-
S
-
G
D
F
P
----------
P
G
W
I
V
L
G
41
SP3
65.57
22%
-82
* C5 *
0.37
1H9R
-
MODE_ECOLI
A:
[78-139]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
N
Q
----
L
P
--
G
I
I
--
S
H
--
I
--
E
-
R
------
G
A
E
-
Q
C
E
V
L
-
M
A
--
L
PDGQ
T
----
L
---
C
A
T
V
-
P
---------
V
N
----
E
A
T
-----
S
L
Q
----------
Q
G
Q
N
V
T
A
4
Fugue
62.45
27%
26
- C5 -
0.47
1NOZ
-
DPOL_BPT4
A:
[2-370]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D
E
F
Y
I
-
S
I
E
T
----
V
G
--
N
N
I
--
V
E
R
Y
I
D-
E
-
N
------
G
K
E
-
R
T
R
E
V
-
E
Y
--
L
----
P
--------
T
M
F
R
------------
H
C
--
K
E
G
--------------------
K
N
C
A
P
Q
2
Fugue
62.24
20%
12
- C5 -
0.60
2MYW
-
?
A:
[7-85]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGRENLYFQGHMAAPARF
C
V
Y
Y
-
D
G
H
L
----
P
A
--
T
R
V
--
L
L
M
Y
V
--
R
-
I
------
G
T
T
-
A
T
I
T
A
-
R
G
--
H
----
E
----
F
---
E
V
E
A
K
D
---------
Q
N
C
--
K
V
I
L
T
-
N
G
K
Q
A
P
----------
D
W
L
A
A
E
P
16
Fugue
57.70
28%
75
- C5 -
0.30
1HL6
-
MGN_DROME
B:
[4-146]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNTMIRKEAFVHQSVMEELKRIIIDSEIMQEDD
L
P
W
P
-
P
P
D
R
----
V
G
-------------------------
R
-
Q
E
L
E
I
-
V
I
GD
E
----
H
----
I
---
S
F
T
T
-
S
---------
K
T
L
--
V
D
V
N
R
-
S
-
K
D
-
P
----------
E
G
L
R
C
F
Y
6
Fugue
57.36
24%
38
- C5 -
0.34
2PNY
4
IDI2_HUMAN
A:
[14-246]
------------------------------------------------------------------------------------------------------------------------------------------------------------------LVPRGSMSDINLDWVDRRQLQRLEEMLIVVDENDKVIGADTKRNCHLNENIEKGLLHRAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIP
G
E
Q
I
-
S
P
E
D
----
I
----
V
F
--
M
T
I
Y
H
--
H
-
K
------
A
K
S
D
R
I
W
G
E
-
H
E
--
I
----
C
----
Y
---
L
L
L
V
-
R
---------
K
N
-----
V
T
L
-
N
-
P
D
P
S
----------
E
T
K
S
I
L
Y
1
Fugue
56.72
12%
-7
- C5 -
0.62
2MM2
-
?
A:
[1-65]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N
C
T
A
N
-
I
L
N
I
----
N
E
--
V
V
I
--
A
T
G
C
V
--
P
-
A
------
G
G
N
-
L
I
I
R
V
G
S
D
--
H
----
S
----
Y
---
L
I
R
A
-
T
---------
V
S
C
G-
L
S
L
N
P
-
S
-
Q
S
F
I
----------
N
G
E
S
L
A
S
5
Fugue
55.41
20%
-50
- C- -
-
4QQ6
-
SMN_HUMAN
A:
[90-147]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
Q
W
-----
K
----
V
G
--
D
K
C
--
S
A
I
W
S
--
E
-
D
------
G
C
I
-
Y
P
A
T
I
-
A
S
--
I
DFK-
R
----
E
---
T
C
V
V
-
V
---------
Y
T
G
--
Y
G
N
R
E
-
E
-
Q
N
L
S
----------
D
L
L
S
P
I
C
19
HHSearch
50.34
26%
-248
* C8 *
-
5MKD
-
BSLB_BACSU
D:
[13-49]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
-
K
E
W
T
I
-
S
D
--
I
----
E
----
V
---
T
Y
K
P
-
N
---------
A
V
L
--
S
L
G
A
V
-
E
-
F
Q
F
P
----------
D
G
F
H
A
T
-
20
HHSearch
47.76
26%
-224
- C8 -
-
5MKD
-
BSLB_BACSU
C:
[13-47]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
-
K
E
W
T
I
-
S
D
--
I
----
E
----
V
---
T
Y
K
P
-
N
---------
A
V
L
--
S
L
G
A
V
-
E
-
F
Q
F
P
----------
D
G
F
H
A
T
-
42
SP3
47.45
22%
-19
- C5 -
0.39
1G5V
-
SMN_HUMAN
A:
[90-145]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
Q
W
-----
K
----
V
G
--
D
K
C
--
S
A
I
W
S
--
E
-
D
------
G
C
I
-
Y
P
A
T
I
-
A
S
--
I
----
D
----
F
KRE
T
C
V
V
-
V
YTGY-----
G
N
---
R
E
E
Q
N
-
L
-
S
D
L
L
----------
S
P
I
----
40
SP3
46.61
20%
-21
- C5 -
0.43
1EA9
-
?
C:
[504-583]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
F
K
F
L
-
T
A
E
K
--------
N
S
R
--
Q
I
A
Y
L
--
R
-
E
------
D
D
Q
-
D
T
I
L
V
-
V
M
--
N
----
N
DKAG
H
---
T
L
T
L
-
P
---------
V
R
---
H
A
Q
W
T
-
H
-
L
W
Q
D
----------
D
V
L
T
A
A
H
13
Fugue
46.09
20%
119
- C5 -
0.53
2K3D
-
?
A:
[12-98]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFFNEQKEK
V
T
L
Y
-
L
K
H
N
----
I
P
DF
N
T
V
--
T
F
T
N
E
--
E
-
F
------
N
P
I
-
G
I
S
I
D
-
G
Y
--
I
NNDK
N
----
L
---
S
F
T
A
-
G
---------
K
D
V
--
K
I
F
S
S
-
S
-
E
E
L
D
----------
K
M
F
Q
E
P
R
11
Fugue
43.08
15%
49
- C5 -
0.35
5WQ8
-
GSPD_VIBCH
A:
[97-646]
GDEVITQVVAVKNVSVRELSPLLRQLIDNAGAGNVVHYDPANIILITGRAAVVNRLAEIIRRVDQAGDKEIEVVELNNASAAEMVRIVEALNKFVADERTNSILISGDPKVRERLKRLIKQLDVEMAAKGNNRVVYLKYAKAEDLVEVLKGVSEVMIAAHADTNSLVLTAPQDIMNAMLEVIGQLDIRRAQVLIEALIVEMAEGDGINLGVQWGSLESGSVIQYGNTGASIGNVMIGLEEAKDTTQTKAVNETTTTKGDYTKLASALSSIQGAAVSIAMGDWTALIN
A
V
S
N
-
D
S
S
S
----
N
I
--
L
S
S
--
P
S
I
T
V
--
M
-
D
------
N
G
E
-
A
S
F
I
V
G
E
E
--
V
----
P
----
V
---
I
T
T
V
-
D
---------
R
K
E
VG
I
K
L
K
V
-
V
-
P
Q
I
N
----------
E
G
N
S
V
Q
L
33
SP3
42.14
18%
4
- C3 -
-
1CSE
-
ICIC_HIRME
I:
[8-70]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
S
F
---
P
E
V
----
V
G
--
K
T
V
DQ
A
R
E
Y
F
--
T
-
L
------
H
Y
P
-
Q
Y
-
N
V
-
Y
F
--
L
----
P
----
E
GS-
P
V
T
L
-
D
---------
L
R
Y
--
N
R
V
R
V
-
F
-
Y
N
P
G
----------
T
N
V
V
N
H
V
34
SP3
42.04
17%
53
- C3 -
-
1LW6
-
ICI2_HORVU
I:
[2-64]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
T
E
WPEL
V
G
--
K
S
V
EE
A
K
K
V
I
--
L
-
Q
------
D
K
P
-
A
A
-
Q
I
-
I
V
--
L
----
P
----
V
GT-
I
V
T
M
-
E
---------
Y
R
I
--
D
R
V
R
L
-
F
-
V
D
-
K
----------
L
D
N
I
A
Q
V
38
SP3
41.79
22%
105
- C5 -
0.14
1TVX
-
CXCL7_HUMAN
A:
[23-86]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LR
C
L
----
C
I
K
----
T
T
--
S
G
I
--
H
P
K
N
I
--
Q
-
S
LEVIGK
G
T
H
-
C
N
-
Q
V
-
E
V
--
I
----
A
----
T
---
L
--------------
K
D
G
--
R
K
I
C
L
-
D
-
P
D
A
P
RIKKIVQKKL
A
G
D
----
26
HHSearch
40.92
32%
6
- C5 -
0.35
2DUR
-
LMAN2_CANLF
A:
[162-201]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
H
D
-
T
F
L
A
V
-
R
Y
--
S
----
R
----
G
---
R
L
T
V
-
M
TDLEDKNEW
K
N
C
--
I
D
I
T
--
G
-
V
R
L
P
----------
T
------
35
SP3
40.58
17%
-37
- C2 -
-
1HG7
-
ANP12_ZOAAM
A:
[1-66]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MN
Q
A
S
V
-
V
A
N
Q
LIP-
I
N
--
T
A
L
--
T
L
V
M
M
RS
E
-
V
------
V
T
P
-
V
G
I
P
A
-
E
D
--
I
----
P
RL--
V
---
S
M
Q
V
-
N
---------
R
A
V
--
P
L
G
T
T
L
M
-
P
D
M
V
----------
K
G
Y
A
A
--
37
SP3
40.51
15%
-31
- C3 -
-
1CPZ
-
COPZ_ENTHA
A:
[1-68]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQEFSVKGMSCNH
C
V
A
R
-
I
E
E
A
----
V
G
--
R
I
S
--
G
V
K
K
V
--
K
V
Q
------
L
K
K
-
E
K
A
V
V
-
K
F
--
D
----
E
----
A
---
N
V
Q
A
-
T
---------
E
I
C
--
Q
A
I
N
-----
E
L
------------
G
Y
Q
A
E
V