@TOME V3
(Feb 2022)
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : TN0001_062800T: (2019-03-29 )
LGCTYSLYNNIGRQLVSYAPVSPGGTIDYKIGRTTHKLKFADTCEFEKSVPRLPDYWKAFGH
Atome Classification :
(20 SA)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.......-..10........20.....--...30---..-.-.....40----...-..--..-..----50..-----..--..--...60.
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGC
T
Y
S
L
-
Y
N
N
I
G
R
Q
L
V
SYAPVSPG
G
T
--
I
D
Y
K
I---GR-
T
-
T
H
K
L
KF-----A
D
T
-
C
E
--
F
E
-KS----V-PR-----L
P
--
D
Y
--
W
K
A
FGH
41
Fugue
73.68
22%
44
* C7 *
0.42
5A6W
4
?
C:
[11-93]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAIDLSRERDPNFFDHPGIPV
P
E
C
F
W
F
M
-
F
K
N
N
V
R
Q
D
A
G
T
C
Y
--
S
S
W
K
--
M
D
M
K
V
---
G
P
-
N
-
W
V
H
I
K
S
-----
D
D
N
-
C
N
--
L
S
-
G
D
-------------
F
P
--
P
G
--
W
I
V
L
G
K
25
SP3
67.60
29%
-7
- C9 -
-
1UNN
-
DPO4_ECOLI
C:
[5-115]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HHVGVERTMAEDIHHWSEC
E
A
I
I
E
R
L
-
Y
P
E
L
E
R
R
L
A
K
V
K
P
---------
D
L
L
I
---
A
R
-
Q
-
G
V
K
L
K
F
-----
D
D
F
-
Q
Q
TT
Q
E
-
H
V
----
W
-
P
R
-----
L
N
KA
D
L
--
I
A
T
A
R
K
46
Fugue
63.19
15%
-73
- C7 -
0.46
2MM2
-
?
A:
[1-65]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
C
T
A
N
I
-
L
N
-
I
N
E
V
V
I
A
T
G
C
V
P
A
G
G
N
--
L
I
I
R
V
---
G
S
D
H
-
S
Y
L
I
R
A
-----
T
V
S
-
C
G
--
L
S
L
N
P
----
S
-
Q
S
-----
F
I
--
N
G
--
E
S
L
A
S
G
36
Fugue
58.07
18%
48
- C7 -
0.47
2MYW
-
?
A:
[7-85]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGRENLYFQGHMAAPA
R
F
C
V
Y
Y
D
--
G
H
L
P
A
T
R
V
L
L
M
Y
V
R
I
G
T
T
--
A
T
I
T
A
---
R
G
-
H
-
E
F
E
V
E
A
-----
K
D
Q
N
C
K
--
V
I
-
L
T
----
N
G
K
Q
-----
A
P
--
D
W
--
L
A
A
E
P
Y
18
HHSearch
53.31
28%
-202
- C12 -
-
2VVF
-
CAPSD_BPPM2
C:
[5-35]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
N
L
N
S
I
P
N
V
A
A
G
N
S
CS
I
K
L
P
I
---
G
Q
-
T
-
Y
E
V
I
D
L
-----
R
---------------------------------------
39
Fugue
53.12
14%
75
- C9 -
-
2KL8
-
?
A:
[1-85]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEMDIRF
R
G
D
D
L
E
A
-
F
E
K
A
L
K
E
M
I
R
Q
A
R
-
K
F
A
G
T
--
V
T
Y
T
L
---
D
G
-
N
-
D
L
E
I
R
I
TGVPE
Q
V
R
-
K
E
--
L
A
-
K
E
----
A
-
E
R
-----
L
A
--
K
E
--
F
N
I
T
V
T
17
HHSearch
52.23
28%
-202
* C12 *
-
2W0C
-
CAPSD_BPPM2
C:
[5-35]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
N
L
N
S
I
P
N
V
A
A
G
N
S
CS
I
K
L
P
I
---
G
Q
-
T
-
Y
E
V
I
D
L
-----
R
---------------------------------------
33
Fugue
50.41
22%
56
- C7 -
0.30
4HU8
1
?
A:
[3-452]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NEITLTIGQQKDLASMVPAKFAGQELSWTSSDPETASVTD
K
G
I
V
T
A
L
K
F
S
S
G
G
A
N
L
F
L
K
A
P
A
T
G
E
A
I
--
I
T
V
T
A
---
G
K
-
Q
-
S
H
S
V
K
V
-----
I
T
T
-
V
K
--
G
K
-
E
D
----
I
-
E
K
-----
L
P
--
P
L
--
K
D
H
F
K
D
23
SP3
45.84
16%
-29
- C7 -
0.44
1RQP
-
FLA_STRCT
A:
[8-298]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RPIIAFMSDLGTTDDSVAQCKGLMYSICPDVTVVDVCHSMTPWDVEEGARYIVDLPRFFPEGTVFATTTYPATGTTTRSVAVRIKQAAKGGARGQWAGSGAGFERAEGSYIYIAPNNGLLTTVLEEHGYLEAYEVTSPKVIPEQPEPTFYSREMVAIPSAHLAAGFPLSEVGRPLEDHEIVRFNRPAVEQDGEALVGVVSAIDHP
F
G
---
N
V
-
W
T
N
I
H
R
T
D
L
E
K
A
G
I
G
Y
G
A
R
--
L
R
L
T
L
D--
G
V
-
L
-
P
F
E
A
P
L
-----
T
P
T
-----
F
A
-
D
A
----
G
-
E
I
GNIAI
Y
L
--
N
-----
S
R
G
Y
43
Fugue
45.21
26%
7
- C6 -
-
5EZM
24
?
A:
[28-578]
SAATGWVVLFVAVALVVWFVSLDMRHLVGPDEGRYAEISREMFASGDWVTIRYNALKYFEKPPFHMWVTVVGYELFGLGEWQARLAVALSGLLGIGVSMMAARRWFGARAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQHPDASVAARRGWMVACWAAMGVAILTKGLVGIALPGLVLVVYTLVTRDWGLWRRLHLALGVVVMLVITVPWFYLVSVRNPEFPNFFFIHEHWQRRSGSVFYFLPLVIGGFLPWAGIFPKLWTAMRARFRPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVALDRLSPRSWGKQLIGMAIVAACGLLASPVVATLNANHIPNSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLGHETVGRPASGADIAPQIAQKLTPEMPLYGVQM
L
D
H
T
L
P
F
-
Y
L
R
H
P
L
M
M
V
G
Q
A
D
-----------------------
E
L
T
F
-----
G
A
T
-
V
E
--
P
Q
-
R
V
----
V
-
P
D
-----
V
D
--
S
F
--
T
K
L
W
K
N
2
HHSearch
41.63
24%
-15
- C7 -
0.34
4IAJ
5
?
C:
[8-46]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
--
I
T
Y
I
D
---
A
S
-
K
N
E
R
T
V
T
F
-----
E
S
Y
-
E
D
--
F
E
-
R
S
QQAC
L
-
I
G
-----
V
A
--
D
Y
--
Y
P
V
---
1
HHSearch
41.16
24%
-14
- C7 -
0.27
4IAJ
2
?
B:
[8-46]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
--
I
T
Y
I
D
---
A
S
-
K
N
E
R
T
V
T
F
-----
E
S
Y
-
E
D
--
F
E
-
R
S
QQAC
L
-
I
G
-----
V
A
--
D
Y
--
Y
P
V
---
21
HHSearch
39.33
23%
-170
- C7 -
0.18
4P27
1
?
A:
[123-153]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
G
C
G
Y
E
K
-
C
G
K
N
Y
L
I
V
C
N
Y
A
P
G
D
S
-
E
D
--
R
P
Y
E
A
---
K
-------------------------------------------------------
34
Fugue
37.86
24%
-172
- C9 -
-
1LOI
1
?
?:
[1-25]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
P
L
-----
V
D
F
-
F
C
--
E
T
-
C
S
----
K
-
P
W
-----
L
V
--
G
W
--
W
D
Q
F
K
R
40
Fugue
37.42
17%
80
- C9 -
-
1EO0
-
TFS2_YEAST
A:
[1-77]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDSKEVLVHVKNLEK
N
K
S
N
D
A
A
-
V
L
E
I
L
H
V
L
D
K
E
F
V
P
T
E
K
L
L
--
R
E
T
K
V
---
G
V
-
E
-
V
N
K
F
K
K
-----
S
T
N
-
V
E
--
I
S
-
K
L
----
V
-
K
K
-----
M
I
--
S
S
--
W
K
D
A
I
N
38
Fugue
37.07
25%
-149
- C9 -
-
3V86
-
?
A:
[1-27]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
-
V
Y
Q
L
K
------
D
E
V
-
G
E
--
L
K
-
G
E
----
V
-
R
A
-----
L
K
--
D
E
--
V
K
D
L
K
-
45
Fugue
36.18
29%
9
- C9 -
-
2MMM
-
?
A:
[26-61]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
G
L
---
K
K
-
L
-
G
K
K
L
E
G
-----
A
G
K
-
R
V
--
F
K
-
A
S
----
E
-
K
A
-----
L
P
--
V
V
VG
I
K
A
I
G
K
22
HHSearch
32.28
12%
-112
- C5 -
-
5ZWN
-
PRP39_YEAST
U:
[573-605]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
I
G
I
T
--
T
E
-
R
P
----
Q
-
I
-
S
N
S
I
I
E
-----
C
N
S
-
G
T
--
L
I
-
Q
K
----
P
-
I
S
-----
L
P
--
N
F
--------
32
SP3
32.25
11%
40
- C9 -
-
1QGU
11
NIFD_KLEPN
A:
[1-478]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TNATGERNLALIQEVLEVFPETARKERRKHMMVSDPKMKSVGKCIISNRKSQPGVMTVRGCAYAGSKGVVFGPIKDMAHISHGPVGCGQYSRAGRRNYYTGVSGVDSFGTLNFTSDFQERDIVFGGDKKLSKLIEEMELLFPLTKGITIQSECPVGLIGDDISAVANASSKALDKPVIPVRCEGF
R
G
V
S
Q
S
L
-
G
H
H
I
A
N
D
V
V
R
D
W
I
L
N
N
R
E
----
G
Q
P
F
---
E
T
-
T
-
P
Y
D
V
A
I
-----
I
G
D
-
Y
N
--
I
G
-
G
D
----
A
-
W
A
-----
S
R
--
I
L
--
L
E
E
M
G
L
30
SP3
31.96
4%
-2
- C9 -
-
1EHI
2
DDL_LEUMM
A:
[3-362]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIAQNGFFLDTESSKKILALEDEQPIVDAFMKTVDASDPLARIHALKSAGDFDIFFPVVHGNLGEDGTLQGLFKLLDKPYVGAPLRGHAVSFDKALTKELLTVNGIRNTKYIVVDPESANNWSWDKIVAELGNIVFVKAANQGSSVGISRVTNAEEYTEALSDSFQYDYKVLIEEAVNGARELEVGVIGNDQPLVSEIGAHTVPNQGSGDGWYDYNNKFVDNSAVHFQIPAQL
S
P
E
V
T
K
E
-
V
K
Q
M
A
L
D
A
Y
K
V
L
N
L
R
G
E
A
R
--
M
D
F
L
L
DEN
N
V
---
P
Y
L
G
E
P
-----
N
T
L
-
P
G
--
F
T
-
N
M
----
S
--
L
-----
F
K
--
R
L
--
W
D
Y
S
D
I