@TOME V3
(Feb 2022)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : CCD92_HUMAN: (2020-01-31 )
MTSPHFSSYDEGPLDVSMAATNLENQLHSAQKNLLFLQREHASTLKGLHSEIRRLQQHCTDLTYELTVKSSEQTGDGTSKSSELKKRCEELEAQLKVKENENAELLKELEQKNAMITVLENTIKEREKKYLEELKAKSHKLTLLSSELEQRASTIAYLTSQLHAAKKKLMSSSGTSDASPSGSPVLASYKPAPPKDKLPETPRRRMKKSLSAPLHPEFEEVYRFGAESRKLLLREPVDAMPDPTPFLLARESAEVHLIKERPLVIPPIASDRSGEQHSPAREKPHKAHVGVAHRIHHATPPQAQPEVKTLAVDQVNGGKVVRKHSGTDRTV
Atome Classification :
(20 SA)
-.........-10........20........30........40........50--........60........70....---....80........90........100........---110.......120...---...-----.130.......140.......150.......160.......170.......180...--------....190.......200.......210.......-220.......230.......240.------......250.......260.......270.......280.......290.......300.......310.......320.......330
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-MTSPHFSSY-DEGPLD
V
S
M
A
A
T
N
L
E
N
Q
L
H
S
A
Q
K
N
L
L
F
L
Q
R
E
H
A
S
T
L
K
G
L
H
S
E
--
I
R
R
L
Q
Q
H
CTD
L
T
Y
E
L
T
VKSSEQTG---DGTS
K
S
S
E
L
K
K
R
C
E
E
L
E
A
Q
L
K
VKEN-E
N
A
E
L
L
K
E
L
---
E
QKNA
M
I
T
V
L
E
N
T
I
K
E
---
R
E
K
-----
K
Y
L
E
E
L
K
AKS
H
K
L
T
L
L
S
S
E
L
E
Q
R
A
S
T
I
A
Y
L
T
S
Q
L
H
A
A
K
K
K
L
M
SSSGTSDASPSGS
P
V
--------
L
ASYKPAPPKDKLPE
T
P
R
R
R
M
K
K
S
LSAPLHP
E
F
E
-
E
V
Y
R
FGAES
R
K
L
L
LREPVDAMPDP------T
P
F
L
L
ARESA
E
V
H
L
I
KER
P
L
V
IPPIASDRSGEQHSPAREKPHKAHV
G
V
A
H
R
IHHATPPQAQPE
V
K
T
L
A
V
D
QVNG
G
K
V
V
R
KHSGTDRTV
50
Fugue
73.88
12%
-22
- C4 -
-
4RP9
8
ULAA_ECOLI
A:
[6-456]
N
I
F
T
V
F
F
N
Q
V
M
T
N
A
P
L
L
L
G
I
V
T
C
L
G
Y
I
L
L
R
---
K
S
V
S
V
I
I
K
G
T
I
K
T
I
I
G
F
M
-
L
--
L
Q
A
G
S
G
I
L
T
S
T
F
K
P
V
V
A
K
M
S
E
V
Y
G
---
I
N
G
A
I
S
D
T
Y
A
S
M
M
A
T
I
D
-
R
M
G
D
A
Y
S
-
W
V
G
Y
A
V
L
L
A
---
L
A
L
N
I
C
Y
V
L
L
R
R
I
T
G
I
---
R
T
I
MLTGH
I
M
F
Q
Q
A
G
L
I
A
V
T
L
F
I
F
G
Y
S
M
W
T
T
I
I
C
T
A
I
L
V
S
L
Y
W
G
I
T
S
N
M
M
Y
K
P
T
Q
E
V
T
D
G
C
G
F
S
I
GHQQQFAS
W
I
A
Y
K
V
A
P
F
L
G
K
K
E
E
S
V
E
D
L
K
L
P
G
W
L
N
I
F
H
D
N
I
V
S
T
A
I
V
M
T
I
F
F
G
A
I
L
L
S
F
G
I
D
T
V
Q
A
M
AGKVHW
T
V
Y
I
L
Q
T
G
F
S
F
A
V
A
I
F
I
I
T
Q
G
V
R
M
F
V
A
E
L
S
E
A
F
N
G
I
S
Q
R
L
I
P
G
A
V
L
A
I
D
C
A
A
I
Y
S
F
A
P
N
A
V
V
W
G
F
M
W
G
T
I
G
Q
L
I
A
V
G
I
L
V
A
C
G
S
S
I
L
I
13
PsiBlast_PDB
55.57
29%
0
- C- -
-
4OHH
-
PTN11_HUMAN
A:
[127-239]
---------------------------------------------
T
E
K
G
K
H
G
S
FL
V
R
E
S
Q
S
H
P
G
D
F
V
--
L
S
V
R
T
G
D
D
--N--
D
G
K
S
K
V
T
H
V
M
I
R
C
Q
E
L
K
Y
D
V
G
G
G
E
R
F
D
S
L
T
D
L
V
E
H
---
Y
K
K
N
P
M
V
E
T
L
G
T
V
L
Q
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
52.69
30%
0
- C- -
-
6CMR
-
PTN11_HUMAN
A:
[130-241]
---------------------------------------------
T
E
K
G
K
H
G
S
FL
V
R
E
S
Q
S
H
P
G
D
F
V
--
L
S
V
R
T
G
D
D
--SN-
D
G
K
S
K
V
T
H
V
M
I
R
C
Q
E
L
--
K
Y
D
V
G
G
G
-
E
R
F
D
S
L
T
D
L
VEH
Y
K
K
N
P
M
V
E
T
L
G
T
V
L
Q
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
51.45
30%
0
- C- -
-
6CMS
-
PTN11_HUMAN
A:
[130-240]
---------------------------------------------
T
E
K
G
K
H
G
S
FL
V
R
E
S
Q
S
H
P
G
D
F
V
--
L
S
V
R
T
G
D
D
K
G
ESN
D
G
K
S
K
V
T
H
V
M
I
R
C
Q
E
L
--
K
Y
D
V
G
G
G
-
E
R
F
D
S
L
T
D
L
VEH
Y
K
K
N
P
M
V
E
T
L
G
T
V
L
Q
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
51.45
30%
0
- C- -
-
6CMP
-
PTN11_HUMAN
A:
[130-241]
---------------------------------------------
T
E
K
G
K
H
G
S
FL
V
R
E
S
Q
S
H
P
G
D
F
V
--
L
S
V
R
T
G
D
D
K
G
ESN
D
G
K
S
K
V
T
H
V
M
I
R
C
Q
E
L
--
K
Y
D
V
G
G
G
-
E
R
F
D
S
L
T
D
L
VEH
Y
K
K
N
P
M
V
E
T
L
G
T
V
L
Q
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44
Fugue
51.14
12%
21
- C4 -
-
4LL7
1
SHE3_YEAST
A:
[2-95]
-----------------------------------------------------------------------------------------------
S
R
V
I
E
S
L
H
D
Q
I
D
-
M
L
T
K
T
N
L
Q
L
---
T
T
Q
S
Q
N
L
L
S
K
L
E
L
A
Q
S
---
K
E
S
-----
K
L
L
E
N
L
N
L
L
K
N
E
N
E
N
L
N
S
I
F
E
R
K
N
K
K
L
K
E
L
E
K
D
Y
S
E
L
S
N
R
Y
N
E
Q
K
E
K
M
D
Q
L
S
K
L
--------------------------------------------------------------------------------------------------------------------------------------------------------------------
29
HHSearch
50.56
27%
83
- C4 -
-
4LL7
1
SHE3_YEAST
A:
[4-84]
---------------------------------------------
V
I
E
S
L
H
D
Q
--
I
D
M
L
T
K
T
N
L
Q
L
T
T
Q
S
Q
N
L
-----------
L
S
K
L
E
L
A
Q
S
K
E
S
K
L
L
E
N
L
N
L
L
K
N
-
E
N
E
N
L
N
S
I
F
---
E
R
K
N
K
K
L
K
E
L
E
K
D
Y
S
E
---
L
S
N
-----
R
Y
N
E
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28
HHSearch
50.34
27%
-35
- C4 -
-
4LL7
-
SHE3_YEAST
G:
[9-84]
--------------------------------------------------
H
D
Q
--
I
D
M
L
T
K
T
N
L
Q
L
T
T
Q
S
Q
N
L
-----------
L
S
K
L
E
L
A
Q
S
K
E
S
K
L
L
E
N
L
N
L
L
K
N
-
E
N
E
N
L
N
S
I
F
---
E
R
K
N
K
K
L
K
E
L
E
K
D
Y
S
E
---
L
S
N
-----
R
Y
N
E
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
PsiBlast_PDB
49.86
30%
0
- C- -
-
6CRG
-
PTN11_HUMAN
A:
[128-237]
---------------------------------------------
T
E
K
G
K
H
G
S
FL
V
R
E
S
Q
S
H
P
G
D
F
V
--
L
S
V
R
T
G
----SN-
D
G
K
S
K
V
T
H
V
M
I
R
C
Q
E
L
--
K
Y
D
V
G
G
G
-
E
R
F
D
S
L
T
D
L
VEH
Y
K
K
N
P
M
V
E
T
L
G
T
V
L
Q
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
47
Fugue
46.77
18%
230
- C4 -
-
3Q8T
-
BECN1_RAT
A:
[172-265]
------------------------------------------------------------------------------
G
---
S
D
S
E
Q
L
Q
R
E
L
K
E
L
A
L
E
E
E
R
L
I
Q
E
L
E
-
D
V
E
K
N
R
K
V
V
---
A
E
N
L
E
K
V
Q
A
E
A
E
R
L
D
Q
---
E
E
A
-----
Q
Y
Q
R
E
Y
S
E
F
K
R
Q
Q
L
E
L
D
D
E
L
K
S
V
E
N
Q
M
R
Y
A
Q
M
Q
L
D
K
L
K
K
K
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
39
HHSearch
46.44
15%
21
- C4 -
-
2V66
-
NDEL1_HUMAN
B:
[15-105]
------------------------
L
K
Y
E
V
E
A
L
K
E
K
L
E
H
Q
Y
A
Q
S
Y
K
Q
V
S
V
L
E
D
D
--
L
S
Q
T
R
A
I
K
E
Q
L
H
K
Y
V
R
E
L
E
Q
A
N
D
----
D
L
E
R
A
K
R
A
T
I
V
S
L
E
D
F
E
Q
R
L
N
Q
A
I
E
-
R
N
A
F
L
E
S
E
L
---
D
E
K
E
S
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
56
Fugue
44.25
16%
146
- C4 -
-
3QH9
1
A:
[14-79]
-----------------------------------------------------------------------------
Q
E
---
E
K
Q
R
K
A
E
E
L
L
Q
E
L
R
H
L
K
I
K
V
E
E
L
E
N
-
E
R
N
Q
Y
E
W
K
L
---
K
A
T
K
A
E
V
A
Q
L
Q
E
Q
V
A
L
---
K
D
A
-----
E
I
E
R
L
H
S
Q
L
S
R
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
HHSearch
43.29
36%
-
- C4 -
-
5FIY
-
PAWR_RAT
B:
[30-71]
----------------------------------------------------------------------------------------
S
T
L
E
K
R
I
E
D
L
E
K
E
V
L
R
E
R
Q
-
E
N
L
R
L
T
R
L
M
---
Q
D
K
E
E
M
I
G
K
L
K
E
E
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
HHSearch
43.15
18%
-423
- C4 -
-
6GAP
-
SIGM1_REOVD
B:
[76-115]
------------------------------------------------------------------------------------------
A
Q
L
A
I
S
R
L
E
S
S
I
G
A
L
Q
T
-
V
V
N
G
L
D
S
S
V
---
T
Q
L
G
A
R
V
G
Q
L
E
T
G
L
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
42.77
29%
89
- C4 -
-
6ATD
-
PTN11_HUMAN
A:
[129-233]
---------------------------------------------
T
E
K
G
K
H
G
S
FL
V
R
E
S
Q
S
H
P
G
D
F
V
--
L
S
V
R
T
G
D
------
D
G
K
S
K
V
T
H
V
M
I
R
C
Q
E
L
K
Y
D
V
G
G
G
E
R
F
D
S
L
T
D
L
V
E
H
---
Y
K
K
N
P
M
V
E
T
L
G
T
V
L
Q
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
43
Fugue
42.51
31%
2
- C4 -
-
3HE5
-
?
A:
[0-46]
-------------------------------------------------------------------------------------------
S
N
L
V
A
Q
L
E
N
E
V
A
S
L
E
N
-
E
N
E
T
L
K
K
K
N
---
L
H
K
K
D
L
I
A
Y
L
E
K
E
I
A
N
---
L
R
K
-----
K
I
E
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
51
Fugue
42.49
23%
-88
- C4 -
-
3EFG
1
SLYX_XANCP
A:
[8-58]
--------------------------------------------------------------------------------------
R
D
Q
E
L
E
A
R
L
V
E
L
E
T
R
L
S
F
Q
E
Q
-
A
L
T
E
L
S
E
A
L
---
A
D
A
R
L
T
G
A
R
N
A
E
L
I
R
H
---
L
L
E
-----
D
L
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41
Fugue
42.42
12%
70
- C4 -
-
5D3A
1
KI21A_HUMAN
A:
[1-82]
-----------------------------------------------------------------------------------------------------
G
S
M
T
I
S
-
N
M
E
A
D
M
N
R
L
---
L
K
Q
R
E
E
L
T
K
R
R
E
K
L
S
K
---
R
R
E
-----
K
I
V
K
E
N
G
E
G
D
K
N
V
A
N
I
N
E
E
M
E
S
L
T
A
N
I
D
Y
I
N
D
S
I
S
D
C
Q
A
N
I
M
Q
M
E
E
A
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
HHSearch
42.24
16%
-200
- C4 -
-
6GAP
-
SIGM1_REOVD
A:
[77-148]
-------------------------------------------------------------------------------------------
Q
L
A
I
S
R
L
E
S
S
I
G
A
L
Q
T
-
V
V
N
G
L
D
S
S
V
---
T
Q
L
G
A
R
V
G
Q
L
E
T
G
L
A
E
LRV
D
H
D
-----
N
L
V
A
R
V
D
T
A
E
R
N
I
G
S
L
T
T
E
L
S
T
L
T
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
48
Fugue
42.12
20%
13
- C4 -
-
3M0A
-
TRAF2_HUMAN
A:
[2-63]
-----------------------------------------------------------------------------------------
E
L
L
Q
R
C
E
S
L
E
K
K
T
A
T
F
E
N
-
I
V
C
V
L
N
R
E
V
---
E
R
V
A
M
T
A
E
A
C
S
R
Q
H
R
L
---
D
Q
D
-----
K
I
E
A
L
S
S
K
V
Q
Q
L
E
R
S
I
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------