@TOME V3
(Feb 2022)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : H14_HUMAN: (2020-02-01 )
MSETAPAAPAAPAPAEKTPVKKKARKSAGAAKRKASGPPVSELITKAVAASKERSGVSLAALKKALAAAGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKPKAKKAGAAKAKKPAGAAKKPKKATGAATPKKSAKKTPKKAKKPAAAAGAKKAKSPKKAKAAKPKKAPKSPAKAKAVKPKAAKPKTAKPKAAKPKKAAAKKK
Atome Classification :
(20 SA)
-----------------------------------------------.........10........20........30.......-------.40........50-------........-----------.60........----70.---.----.-..---...80........90---------------.........100.......110.......120..--------------------------------------------.....130-------------........140......---------.150.--......160.......170.......180.......190.......200.......210.......
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-----------------------------------------------MSETAPAAPAAPAPAEKT
P
V
K
K
K
A
R
K
SAGAAKRKASGP-------
P
V
S
E
L
I
T
K
A
V
AA--------SKERSG
V
S
-----------
L
A
A
L
K
K
A
L
A
AA----GYD---V----E-KN---N
S
R
I
K
L
G
L
K
S
LVSK----------------G
T
L
V
Q
TKGTGASG
S
F
K
L
NKKAASGEAKPKAKKAG--------------------------------------------AAKAKKP--------------AGAAKKPKKATGAATPK---------
K
S
AKK--T
P
K
KAKKPAAAAGAKKAKSPKKAKAAKPKKAPKSPAKAKAVKPKAAKPKTAKPKAAKP
K
K
AAAKKK
1
PsiBlast_PDB
66.09
89%
-92
- C7 -
-
1GHC
-
H11L_CHICK
A:
[3-75]
-----------------------------------------------------------------------------------
G
P
-------
S
V
T
E
L
I
T
K
A
V
S
A
--------
S
K
E
R
K
G
L
S
-----------
L
A
A
L
K
K
A
L
A
A
G
----
G
Y
D
---
V
----
E
-
K
N
---
N
S
R
I
K
L
G
L
K
S
L
V
S
K
----------------
G
T
L
V
Q
T
K
G
T
G
A
S
G
S
F
R
L
S
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
HHSearch
65.75
88%
-87
- C7 -
-
1GHC
-
H11L_CHICK
A:
[2-75]
----------------------------------------------------------------------------------
A
G
P
-------
S
V
T
E
L
I
T
K
A
V
S
A
--------
S
K
E
R
K
G
L
S
-----------
L
A
A
L
K
K
A
L
A
A
G
----
G
Y
D
---
V
----
E
-
K
N
---
N
S
R
I
K
L
G
L
K
S
L
V
S
K
----------------
G
T
L
V
Q
T
K
G
T
G
A
S
G
S
F
R
L
S
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
HHSearch
58.70
45%
-1
- C7 -
-
5WCU
-
H5_CHICK
V:
[2-76]
---------------------------------------------------------------------------------
A
S
H
P
-------
T
Y
S
E
M
I
A
A
A
I
R
A
--------
E
K
S
R
G
G
S
S
-----------
R
Q
S
I
Q
K
Y
I
K
S
-----
H
Y
K
---
V
----
G
H
N
A
---
D
L
Q
I
K
L
S
I
R
R
L
L
A
A
----------------
G
V
L
K
Q
T
K
G
V
G
A
S
G
S
F
R
L
A
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44
Fugue
56.05
14%
86
* C6 *
-
5T9Y
10
?
A:
[1-321]
-------------------------------RLCLRNYPDTTWIGDS
R
S
D
Q
S
R
V
N
P
Q
S
L
D
L
V
T
E
F
K
G
V
L
Q
A
K
N
G
N
G
L
-
L
K
Q
M
S
G
R
FPSDWYT
P
T
T
K
Y
R
I
L
Y
L
G
T
--------
N
D
C
T
D
G
P
T
DMIIPTSMTLD
N
A
A
R
E
L
Y
L
G
A
C
----
R
G
D
---
V
----
R
-
V
T
---
P
T
F
V
G
A
A
I
V
G
L
V
G
R
TDAVTGFSVKVLTFSS
P
T
I
V
V
V
G
L
N
G
M
S
G
I
Y
K
V
C
I
A
A
T
S
G
N
V
G
G
V
K
L
I
N
G
CGYFNTPLRFDNFQGQIYVSDTFEVRGTKNKCVLLRSSSDTPLC
S
H
I
M
R
N
V
--------------
E
L
D
E
Y
V
D
T
P
N
T
G
G
V
Y
P
S
DGFDSLHGS
A
S
V
R
T
--
F
L
T
D
A
L
T
C
P
D
I
D
W
S
R
I
D
A
A
S
C
E
Y
D
S
C
P
K
M
V
K
D
F
D
Q
T
S
L
G
N
T
D
T
L
I
M
R
E
V
A
L
H
K
E
M
I
S
K
L
Q
R
D
I
T
D
V
27
HHSearch
55.38
41%
-9
- C7 -
-
1HST
-
H5_CHICK
B:
[24-97]
----------------------------------------------------------------------------------
S
H
P
-------
T
Y
S
E
M
I
A
A
A
I
R
A
--------
E
K
S
R
G
G
S
S
-----------
R
Q
S
I
Q
K
Y
I
K
S
-----
H
Y
K
---
V
----
G
H
N
A
---
D
L
Q
I
K
L
S
I
R
R
L
L
A
A
----------------
G
V
L
K
Q
T
K
G
V
G
A
S
G
S
F
R
L
A
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
53.79
44%
-3
- C7 -
-
4QLC
-
H5_CHICK
U:
[2-74]
---------------------------------------------------------------------------------
A
S
H
P
-------
T
Y
S
E
M
I
A
A
A
I
R
A
--------
E
K
S
R
G
G
S
S
-----------
R
Q
S
I
Q
K
Y
I
K
S
H
-----
Y
K
---
V
----
G
-
H
N
A--
D
L
Q
I
K
L
S
I
R
R
L
L
A
A
----------------
G
V
L
K
Q
T
K
G
V
G
A
S
G
S
F
R
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
53.37
44%
-7
- C7 -
-
5WCU
-
H5_CHICK
U:
[2-74]
---------------------------------------------------------------------------------
A
S
H
P
-------
T
Y
S
E
M
I
A
A
A
I
R
A
--------
E
K
S
R
G
G
S
S
-----------
R
Q
S
I
Q
K
Y
I
K
S
H
-----
Y
K
---
V
----
G
-
H
N
A--
D
L
Q
I
K
L
S
I
R
R
L
L
A
A
----------------
G
V
L
K
Q
T
K
G
V
G
A
S
G
S
F
R
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
53.25
43%
-23
- C7 -
-
1HST
-
H5_CHICK
A:
[24-95]
----------------------------------------------------------------------------------
S
H
P
-------
T
Y
S
E
M
I
A
A
A
I
R
A
--------
E
K
S
R
G
G
S
S
-----------
R
Q
S
I
Q
K
Y
I
K
S
H
-----
Y
K
---
V
----
G
-
H
N
A--
D
L
Q
I
K
L
S
I
R
R
L
L
A
A
----------------
G
V
L
K
Q
T
K
G
V
G
A
S
G
S
F
R
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
HHSearch
51.85
35%
23
- C7 -
-
2LSO
-
H1X_HUMAN
A:
[3-82]
---------------------------------------------------------------------------------
M
Q
P
G
-------
K
Y
S
Q
L
V
V
E
T
I
R
R
--------
L
G
E
R
N
G
S
S
-----------
L
A
K
I
Y
T
E
A
K
K
V
P---
W
F
D
---
Q
----
Q
-
N
G
---
R
T
Y
L
K
Y
S
I
K
A
L
V
Q
N
----------------
D
T
L
L
Q
V
K
G
T
G
A
N
G
S
F
K
L
N
R
K
K
L
E
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
51
Fugue
51.81
14%
113
- C6 -
-
5E8J
2
MCES_HUMAN
A:
[3-312]
SRIFYLRNFNNWMKSVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLL
K
W
K
K
G
R
I
N
K
L
V
C
T
D
I
A
D
V
S
V
K
Q
C
Q
Q
R
Y
E
D
M
K
N
R
R
D
S
E
Y
-------
I
F
S
A
E
F
I
T
A
D
S
S
KELLIDKF
R
D
P
Q
M
C
F
D
-----------
I
C
S
C
Q
F
V
C
H
Y
S
----
F
E
S
---
Y
----
E
-
Q
A
---
D
M
M
L
R
N
A
C
E
R
L
S
P
G
----------------
G
Y
F
I
G
T
T
P
N
----
S
F
E
L
I
R
R
L
E
A
S
E
T
E
S
F
G
N
E
I
Y
--------------------------------------------
T
V
K
F
Q
K
K
GDYPLFGCKYDFNL
E
G
V
V
D
V
P
E
F
L
V
Y
F
P
L
L
N
---------
E
M
A
K
K
YN
M
K
L
V
Y
K
K
T
F
L
E
F
Y
E
E
K
I
K
N
N
E
N
K
M
L
L
K
R
M
Q
A
L
E
P
Y
P
A
N
E
S
S
K
L
V
S
E
K
V
D
D
Y
E
H
A
A
K
Y
M
K
N
S
Q
V
R
L
P
21
HHSearch
51.70
45%
6
- C7 -
-
5NL0
-
H10B_XENLA
Z:
[25-97]
-----------------------------------------------------------------------------------
H
P
-------
K
Y
S
D
M
I
L
A
A
V
Q
A
--------
E
K
S
R
S
G
S
S
-----------
R
Q
S
I
Q
K
Y
I
K
N
-----
H
Y
K
---
V
----
G
E
N
A
---
D
S
Q
I
K
L
S
I
K
R
L
V
T
S
----------------
G
A
L
K
Q
T
K
G
V
G
A
S
G
S
F
R
L
A
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
HHSearch
50.44
41%
20
- C7 -
-
6N88
-
?
C:
[24-97]
----------------------------------------------------------------------------------
D
H
P
-------
K
Y
S
D
M
I
V
A
A
I
Q
A
--------
E
K
N
R
A
G
S
S
-----------
R
Q
S
I
Q
K
Y
I
K
S
-----
H
Y
K
---
V
----
G
E
N
A
---
D
S
Q
I
K
L
S
I
K
R
L
V
T
T
----------------
G
V
L
K
Q
T
K
G
V
G
A
S
G
S
F
R
L
A
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
50.43
41%
-4
- C7 -
-
5NL0
-
H10B_XENLA
Z:
[25-95]
-----------------------------------------------------------------------------------
H
P
-------
K
Y
S
D
M
I
L
A
A
V
Q
A
--------
E
K
S
R
S
G
S
S
-----------
R
Q
S
I
Q
K
Y
I
K
N
H
-----
Y
K
---
V
----
G
-
E
N
A--
D
S
Q
I
K
L
S
I
K
R
L
V
T
S
----------------
G
A
L
K
Q
T
K
G
V
G
A
S
G
S
F
R
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
49.19
40%
12
- C7 -
-
6N88
-
?
C:
[24-95]
----------------------------------------------------------------------------------
D
H
P
-------
K
Y
S
D
M
I
V
A
A
I
Q
A
--------
E
K
N
R
A
G
S
S
-----------
R
Q
S
I
Q
K
Y
I
K
S
H
-----
Y
K
---
V
----
G
-
E
N
A--
D
S
Q
I
K
L
S
I
K
R
L
V
T
T
----------------
G
V
L
K
Q
T
K
G
V
G
A
S
G
S
F
R
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
47.11
39%
37
- C7 -
-
2LSO
-
H1X_HUMAN
A:
[9-83]
----------------------------------------------------------------------------------------------
S
Q
L
V
V
E
T
I
R
R
--------
L
G
E
R
N
G
S
S
-----------
L
A
---
K
I
Y
T
E
A
KKVP
W
F
D
---
Q
----
Q
-
N
G
---
R
T
Y
L
K
Y
S
I
K
A
L
V
Q
N
----------------
D
T
L
L
Q
V
K
G
T
G
A
N
G
S
F
K
L
N
R
K
K
L
E
G
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
45.86
40%
20
- C7 -
-
6N89
-
?
B:
[24-95]
----------------------------------------------------------------------------------
D
H
P
-------
K
Y
S
D
M
I
V
A
A
I
Q
A
--------
E
K
N
R
A
G
S
S
-----------
R
Q
S
I
Q
K
Y
I
K
S
H
-----
Y
K
---
V
----
G
-
E
N
A--
D
S
Q
I
K
L
S
I
K
R
L
V
T
T
----------------
G
V
L
K
Q
T
K
G
V
G
A
S
G
S
F
R
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28
HHSearch
45.80
32%
53
- C7 -
-
1YQA
-
H1_YEAST
A:
[172-254]
------------------------------------------------------------------------------
A
S
S
P
S
S
L
-------
T
Y
K
E
M
I
L
K
S
M
P
Q
--------
L
N
D
G
K
G
S
S
-----------
R
I
V
L
K
K
Y
V
K
D
-----
T
Y
P
---
I
VGSA
S
-
N
F
---
D
Y
L
F
N
S
A
I
K
K
C
V
E
N
----------------
G
E
L
V
Q
P
K
--
G
P
S
G
I
I
K
L
N
K
K
K
V
K
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42
Fugue
44.99
29%
62
- C7 -
-
1YQA
-
H1_YEAST
A:
[171-257]
-----------------------------------------------------------------------------
K
A
S
S
P
S
S
L
-------
T
Y
K
E
M
I
L
K
S
M
P
Q
--------
L
N
D
G
K
G
S
S
-----------
R
I
V
L
K
K
Y
V
K
D
T
----
Y
P
I
---
V
----
G
-
S
A
SNF
D
Y
L
F
N
S
A
I
K
K
C
V
E
N
----------------
G
E
L
V
Q
P
K
G
--
P
S
G
I
I
K
L
N
K
K
K
V
K
L
S
T
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29
HHSearch
44.94
36%
41
* C7 *
-
1UHM
-
H1_YEAST
A:
[42-117]
---------------------------------------------------------------------------------
A
S
S
K
-------
S
Y
R
E
L
I
I
E
G
L
T
A
--------
L
K
E
R
K
G
S
S
-----------
R
P
A
L
K
K
F
I
K
E
-----
N
Y
P
---
I
VGSA
S
-
N
F
---
D
L
Y
F
N
N
A
I
K
K
G
V
E
A
----------------
G
D
F
E
Q
P
K
G
--
P
A
G
A
V
K
L
A
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
HHSearch
44.83
31%
-27
- C7 -
-
2RQP
-
HP1B3_HUMAN
A:
[153-235]
------------------------------------------------------------------------------
M
A
S
S
P
R
P
-------
K
M
D
A
I
L
T
E
A
I
K
A
--------
C
F
Q
K
S
G
A
S
-----------
V
V
A
I
R
K
Y
I
I
H
-----
K
Y
P
SLE
L
----
E
-
R
R
---
G
Y
L
L
K
Q
A
L
K
R
E
L
N
R
----------------
G
V
I
K
Q
V
K
G
K
G
A
S
G
S
F
V
V
V
Q
K
S
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------