@TOME V3
(Feb 2022)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PIP30_HUMAN: (2020-02-02 )
MDGGDDGNLIIKKRFVSEAELDERRKRRQEEWEKVRKPEDPEECPEEVYDPRSLYERLQEQKDRKQQEYEEQFKFKNMVRGLDEDETNFLDEVSRQQELIEKQRREEELKELKEYRNNLKKVGISQENKKEVEKKLTVKPIETKNKFSQAKLLAGAVKHKSSESGNSVKRLKPDPEPDDKNQEPSSCKSLGNTSLSGPSIHCPSAAVCIGILPGLGAYSGSSDSESSSDSEGTINATGKIVSSIFRTNTFLEAP
Atome Classification :
(20 SA)
--------------------------------------.........10........20.--......----.----------------30......-.---------..40.......-.50.-....-...60........70........---80........90..--......100.---------------..-....-110.----.......120.........130....-...-140....----...150.....----..160.......170.......180...---....190.......200.......210...-----------....-220.......230.......240.-----....---..250..
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------MDGGDDG
N
L
I
I
K
KRFV
S
E
A
E
L
D
--
E
R
R
K
R
R
----
Q
----------------
E
-
E
W
E
KVR-K---------PE
D
P
E
E
C
P
E
E
V-Y
D
P
R
-
S
L
Y
E
-
R
L
Q
E
Q
K
D
R
K
Q
Q
E
Y
E
E
Q
F
K
F
K
N
M
V---RGLDED
E
T
N
F
L
D
E
V
--
S
R
Q
Q
E
L
I
E
K
Q
---------------
R
R
-
E
E
E
L
-
K
-
E
L
----
K
E
Y
R
N
N
L
K
--KVGISQE
N
K
K
E
V
E
K
KL-TVK-PIETKN
K
----
F
S
Q
A
K
L
L
A
G
A
V
----KHKSSESGNSVKRLKPDPEPDDKNQE
P
S
---
S
C
K
SLGNTSLSGPSIHCP
S
A
A
V
C
I
GILPGL-----------GAYS-GSSDSESSSDSE
G
T
I
N
A
T
G
K
I
V
S
S
-----
I
F
RT---NTFLEAP
13
PsiBlast_PDB
84.48
25%
0
- C- -
-
1QVR
-
CLPB_THET8
A:
[402-558]
---------------------------------------------------------
E
I
D
AL
E
R
K
K
L
Q
----
L
----------------
E
I
E
R
E
A
L
K
-
K
---------
E
K
D
P
D
S
-
Q
E
R
L
-
K
A
I
E
-
A
E
I
A
-
K
L
T
E
E
I
A
K
L
R
A
E
W
E
R
E
---
R
E
I
L
---
R
K
L
R
E
A
Q
H
R
-
L
D
E
V
--
R
R
E
I
E
L
A
E
R
Q
YDLNRAAELRYGELP
K
L
-
E
A
E
V
-
E
-
A
L
----
S
E
K
L
R
G
A
R
FV
R
L
E
V
T
E
E
D
I
A
E
I
V
S
R
W
-
T
G
I
-
P
V
------------
S
K
L
L
E
G
------------------------------------------------------------------------------------------------------------------------------
18
PsiBlast_PDB
63.90
23%
169
- C2 -
-
2I1J
1
?
A:
[300-570]
----------------------------------------------------------
I
D
--
V
Q
Q
M
K
A
----
Q
----------------
A
-
R
E
E
K
L
A
-
K
---------
Q
A
Q
R
E
K
L
Q
L
E
I
-----------
A
A
R
E
R
A
E
K
K
Q
Q
E
Y
Q
D
--
R
L
R
Q
M
Q
---
E
E
M
E
R
S
Q
A
N
L
L
E
A
Q
--
D
M
I
L
R
L
E
E
Q
L
---------------
R
Q
-
L
Q
A
A
-
K
E
E
L
----
E
Q
R
Q
N
E
L
Q
--
A
M
M
Q
R
L
E
E
T
K
N
M
E
A
A
E
-
R
Q
K
L
E
D
E
I
R
A
K
-----
E
E
V
S
R
I
Q
Q
E
V
----
E
L
K
D
S
E
T
----
R
R
L
Q
E
E
V
E
D
A
R
R
K
Q
D
----------------------------------------------------------------------------------------------
19
PsiBlast_PDB
63.75
23%
249
- C2 -
-
2I1K
-
?
A:
[300-463]
----------------------------------------------------------
I
D
--
V
Q
Q
M
K
A
----
Q
----------------
A
-
R
E
E
K
L
A
-
K
---------
Q
A
Q
R
E
-----
I
-----------
A
A
R
E
R
A
E
K
K
Q
Q
E
Y
Q
D
--
R
L
R
Q
M
Q
---
E
E
M
E
R
S
Q
A
N
L
L
E
A
Q
--
D
M
I
L
R
L
E
E
Q
L
---------------
R
Q
-
L
Q
A
A
-
K
E
E
L
----
E
Q
R
Q
N
E
L
Q
--
A
M
M
Q
R
L
E
E
T
-----------L
E
D
E
I
R
A
K
----
Q
E
E
V
S
R
I
Q
Q
E
V
----
E
L
K
D
S
E
T
----
R
R
L
Q
E
E
V
E
D
A
R
R
K
Q
D
----------------------------------------------------------------------------------------------
31
Fugue
63.37
17%
94
- C1 -
-
4G9B
2
PGMB_ECOLI
A:
[2-228]
----------------------------VMKLQGVIFD
L
D
G
-----
V
I
T
D
T
A
H
L
H
F
Q
A
W
Q
--
Q
I
A
A
E
I
GISI
D
----------------
A
-
Q
F
N
E
S
L
-
K
---------
G
I
S
R
D
E
S
L
R
R
I
-
L
Q
H
G
-
G
-
K
E
-
G
D
F
N
S
Q
E
R
A
Q
L
A
Y
R
K
N
L
L
Y
V
H
S
L
---
R
E
L
T
V
N
A
V
-----
L
--
P
G
I
R
S
L
L
A
D
L
---------------
R
A
-
Q
Q
------------------
I
--
S
V
G
L
A
S
V
S
L
N
---
A
P
T
-
I
L
A
-
A
L
E
L
R
E
F
----
F
T
F
C
---
A
D
A
S
----
Q
L
K
N
S
---------
K
P
D
P
-----
E
I
F
L
A
---
A
C
A
G
L
G
V
P
P
Q
A
C
I
G
I
E
D
A
Q
A
G
I
D
A
I
N
A
S
G
M
-----------
R
S
V
G
I
G
A
G
L
T
G
A
Q
L
L
L
P
S
T
E
S
L
T
W
P
R
L
S
A
-----
F
W
Q
N
VAE
N
L
Y
F
Q
--
37
Fugue
57.79
15%
112
- C2 -
-
5HMO
-
MYO10_BOVIN
A:
[1-131]
---------------------------------------------------
Q
K
Q
L
R
G
Q
I
A
--
R
R
V
Y
R
Q
----
L
----------------
L
-
A
E
K
R
A
E
-
E
---------
E
K
R
K
R
E
E
E
E
K
R
-
K
R
E
E
-
E
E
R
E
-
R
E
R
E
R
R
E
A
E
L
R
A
Q
Q
E
E
A
A
R
K
Q
R
E
---
L
E
A
L
Q
Q
E
S
Q
R
A
A
E
L
--
S
R
E
L
E
K
Q
K
E
N
---------------
K
Q
-
V
E
E
I
-
L
-
R
L
----
E
K
E
I
E
D
L
Q
--
R
M
K
E
R
Q
E
L
S
L
T
E
A
S
L
Q
-
K
L
Q
-
Q
L
R
D
E
---------------------------------------------------------------------------------------------------------------------------------------------
17
PsiBlast_PDB
57.55
24%
201
- C2 -
-
4YKN
-
P85A_HUMAN (first)
A:
[155-354]
------------------------------------------------------------------
R
L
----
Y
----------------
E
-
E
Y
T
R
T
S
-
Q
---------
E
I
Q
M
K
R
T
A
I
E
A
-
F
N
E
T
I
K
I
F
E
-
E
Q
C
Q
T
Q
E
R
Y
S
K
E
Y
I
E
K
F
K
R
E
G
N
E
---
K
E
I
Q
R
I
M
H
N
Y
D
K
L
K
--
S
R
I
S
E
I
I
D
S
R
---------------
R
R
L
E
E
D
L
K
K
-
Q
A
----
A
E
Y
R
----------------
E
I
D
K
R
M
N
S
I
K
-
P
-------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
56.41
31%
0
- C- -
-
4QQZ
-
?
A:
[768-841]
-------------------------------------------------------------------
R
----
R
----------------
R
-
N
G
A
P
V
Q
-
I
---------
P
E
D
V
Q
Q
L
V
D
D
V
-
Y
D
D
D
-
S
L
A
E
-
D
L
E
A
D
M
E
R
M
G
E
E
L
A
Q
R
G
L
A
R
N
A
V
IPD
P
D
D
A
E
D
N
L
N
G
L
T
E
F
--
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
56.41
31%
0
- C- -
-
4QQW
-
?
A:
[768-841]
-------------------------------------------------------------------
R
----
R
----------------
R
-
N
G
A
P
V
Q
-
I
---------
P
E
D
V
Q
Q
L
V
D
D
V
-
Y
D
D
D
-
S
L
A
E
-
D
L
E
A
D
M
E
R
M
G
E
E
L
A
Q
R
G
L
A
R
N
A
V
IPD
P
D
D
A
E
D
N
L
N
G
L
T
E
F
--
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34
Fugue
56.10
10%
67
* C1 *
-
1Y10
2
Y1264_MYCTU
A:
[14-376]
DDLLGDLGGTARAERAKLVEWLLEQGITPDEIRATNPP
L
L
L
A
T
R
H
L
V
G
D
D
G
T
Y
V
S
A
R
E
I
S
--
E
N
Y
G
V
D
----
L
----------------
E
-
L
L
Q
R
V
Q
-
R
AVGLARVDD
P
D
A
V
V
H
M
R
A
D
G
-
E
A
A
A
-
R
A
Q
R
-
F
V
E
L
G
L
N
P
D
Q
V
V
L
V
V
R
V
L
A
E
G
L
S
---
H
A
A
E
A
M
R
Y
T
A
L
E
A
I
MR
P
G
A
T
E
L
D
I
A
K
---------------
G
S
-
Q
A
L
V
-
S
-
Q
I
----
V
P
L
L
G
P
M
I
--
Q
D
M
L
F
M
Q
L
R
H
M
M
E
T
E
A
-
V
N
A
-
G
E
R
A
A
G
K
PLPG
A
R
Q
V
T
V
A
F
A
D
L
VGFT
Q
L
G
E
V
V
S
A
E
E
L
G
H
L
A
G
R
L
A
G
L
A
R
D
L
T
A
P
PVW
F
I
K
T
I
G
D
A
V
M
L
V
C
P
D
P
A
P
L
L
D
T
V
L
K
L
V
E
V
V
DTDNNFPRLRA
G
V
A
S
-
G
M
A
V
S
R
A
G
D
W
F
G
S
P
V
N
V
A
S
R
V
T
G
V
ARPGA
V
L
V
A
---
D
S
V
R
E
A
L
39
Fugue
53.55
24%
-249
- C2 -
-
4BWD
-
SCOC_HUMAN
A:
[86-146]
--------------------------------------------------------------------------------------------------------------------------------------
V
D
A
E
N
Q
V
E
L
E
E
K
T
R
L
I
N
Q
V
---
M
E
L
Q
H
T
L
E
D
L
S
A
R
V
--
D
A
V
K
E
--
E
N
L
---------------
K
L
-
K
S
E
N
-
Q
-
V
L
----
G
Q
Y
I
E
N
L
M
--
S
A
S
--------------------------------------------------------------------------------------------------------------------------------------------------------------------
40
Fugue
51.79
9%
-103
- C- -
-
4CPC
-
SYCP3_HUMAN
A:
[81-223]
-------------------------------------------------------
I
N
K
A
L
--
L
A
K
R
K
R
----
L
----------------
E
-
M
Y
T
K
A
S
-
L
---------
K
T
S
N
Q
K
I
E
H
V
W
-
K
T
Q
Q
-
D
Q
R
Q
-
K
L
N
Q
E
Y
S
Q
Q
F
L
T
L
F
Q
Q
W
D
L
D
M
Q
K
---
A
E
E
Q
E
E
K
I
L
N
M
F
R
Q
--
Q
Q
K
I
L
Q
Q
S
R
I
---------------
V
Q
-
S
Q
R
L
-
K
-
T
I
----
K
Q
L
Y
E
Q
F
I
--
K
S
M
E
E
L
E
K
N
H
D
N
L
L
T
G
-
A
Q
N
-
E
F
K
K
E
M
A
----
M
L
Q
K
K
I
M
M
E
T
Q
----
Q
Q
E
---------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
49.60
28%
54
- C2 -
-
6AAY
-
?
A:
[1054-1155]
----------------------------------------------------------------------------------------------------------------------------------------------
Y
E
E
N
I
E
W
Q
A
F
L
---
I
----
E
E
E
N
Y
P
Y
V
V
--
E
R
E
I
E
Q
Y
E
K
V
---------------
R
R
-
E
E
L
L
-
K
-
E
V
--------
H
L
I
E
--
E
Y
I
L
E
K
V
K
D
K
E
I
L
K
K
---------
G
D
N
Q
----
N
F
K
Y
Y
I
L
N
G
L
L
----
K
Q
L
K
N
E
D
V
E
S
Y
K
V
F
N
L
N
T
E
P
E
D
V
N
------------------------------------------------------------------------------------------------
42
Fugue
49.10
13%
87
- C2 -
-
4FLA
-
RPR1B_HUMAN
A:
[23-148]
-----------------------------------------------------
L
T
E
E
L
I
K
--
A
L
Q
D
L
E
----
N
----------------
A
-
A
S
G
D
A
T
-
V
---------
R
Q
K
I
A
S
L
P
Q
E
V
-
Q
D
V
S
-
L
L
E
K
I
T
D
K
E
A
A
E
R
L
S
K
T
V
D
E
A
C
L
L
L
A
E
Y
---
N
G
R
L
A
A
E
L
E
D
R
R
Q
L
--
A
R
M
L
V
E
Y
T
Q
N
---------------
Q
K
-
D
V
L
S
-
E
-
K
E
----
K
K
L
E
E
Y
K
Q
--
K
L
A
R
V
T
Q
V
R
K
E
L
K
S
H
I
-
Q
S
L
-
P
-------------------------------------------------------------------------------------------------------------------------------------------------
20
PsiBlast_PDB
47.29
27%
263
- C2 -
-
1DG3
-
GBP1_HUMAN
A:
[485-563]
-----------------------------------------------------------------
K
E
K
----
E
----------------
I
-
E
V
E
R
V
--
K
---------
A
E
S
A
Q
A
S
A
K
M
L
-
H
E
M
Q
-
R
K
N
E
-
Q
M
M
E
Q
K
E
R
S
Y
Q
E
H
-----
L
K
Q
L
T
---
E
K
M
E
N
D
R
V
Q
L
L
K
E
Q
--
E
R
T
L
A
L
-
K
L
Q
---------------
E
Q
-
E
Q
L
L
-
K
-
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
46.83
28%
167
- C2 -
-
5YFP
-
SEC3_YEAST
A:
[638-1332]
----------------------------------------------------------
L
E
--
E
E
R
R
I
K
----
Q
----------------
E
-
E
R
K
R
Q
M
-
E
---------
L
E
H
Q
R
Q
L
E
E
E
E
--------
R
K
-
R
Q
M
E
L
E
A
K
K
Q
M
E
L
K
R
Q
R
Q
F
E
E
E
Q
---
R
L
K
K
E
R
E
L
L
E
I
Q
R
K
--
Q
R
E
Q
E
T
A
E
R
L
---------------
K
K
-
E
E
Q
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
44.90
31%
145
- C2 -
-
4QQY
-
?
A:
[768-846]
-------------------------------------------------------------------
R
----
R
----------------
R
-
N
G
A
P
V
Q
-
I
---------
P
E
D
V
Q
Q
L
V
D
D
V
-
Y
D
D
D
-
S
L
A
E
-
D
L
E
A
D
M
E
R
M
G
E
E
L
A
Q
R
G
L
A
R
N
A
V
IPD
P
D
D
A
E
D
N
L
N
G
L
T
E
F
--
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
44.77
31%
118
- C2 -
-
6C66
-
?
G:
[748-829]
-------------------------------------------------------------------
R
----
R
----------------
R
-
N
G
A
P
V
Q
-
I
---------
P
E
D
V
Q
Q
L
V
D
D
V
-
Y
D
D
D
-
S
L
A
E
-
D
L
E
A
D
M
E
R
M
G
E
E
L
A
Q
R
G
L
A
R
N
A
V
IPD
P
D
D
A
E
D
N
L
N
G
L
T
E
F
--
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45
Fugue
44.54
19%
126
- C2 -
-
5SVA
-
MED4_YEAST
T:
[37-127]
----------------------------------------------------------------------------------------------------------------------------------------
L
S
K
V
Q
L
Y
E
D
L
C
R
Y
E
D
T
L
---
S
K
L
V
E
S
V
D
R
F
K
P
N
L
--
D
I
A
K
D
L
I
R
T
D
---------------
E
A
-
L
F
E
N
-
V
-
K
L
LAEY
D
N
I
Y
R
N
L
Q
--
K
I
D
K
D
S
E
E
L
D
S
K
T
R
K
I
-
L
E
I
-
L
N
E
C
H
D
E
----
L
K
A
------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
43.40
31%
147
- C2 -
-
4QQX
-
?
A:
[768-843]
-------------------------------------------------------------------
R
----
R
----------------
R
-
N
G
A
P
V
Q
-
I
---------
P
E
D
V
Q
Q
L
V
D
D
V
-
Y
D
D
D
-
S
L
A
E
-
D
L
E
A
D
M
E
R
M
G
E
E
L
A
Q
R
G
L
A
R
N
A
V
IPD
P
D
D
A
E
D
N
L
N
G
L
T
E
F
--
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
42.84
27%
53
- C3 -
-
1C9Y
2
OTC_HUMAN
A:
[218-289]
--------------------------------------
L
E
A
A
H
G
G
N
V
L
I
T
D
T
W
I
S
M
G
R
E
E
--
E
K
K
K
R
L
----
Q
AFQGYQVTMKTAKVAA
S
-
D
W
T
F
L
H
C
L
---------
P
R
K
P
E
E
V
D
D
E
V
F
Y
S
P
R
-
S
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------