@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : POMP_HUMAN: (2020-02-02 )
MNARGLGSELKDSIPVTELSASGPFESHDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQQVQRLPFLSSSNLSLDVLRGNDETIGFEDILNDPSQSEVMGEPHLMVEYKLGLL
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.......--.----.10-..------.---...-..20...-..-...30...-..---....40----.----------....------...-----------------.50-..----.---.....-60------......------------.-..70.-------...-.--------.----------..80-..-..-----.--..--.------.90....----..-------..100.-...-....110-.......--.120..-.....130--.--.......-.140
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNARGL
G
--
S
----
E
L
K-DS------I---PVT-ELSASGP-F
E
-
S
H
D
L
-
L
R
K
-
G
F
---
S
C
V
K
N
-----E----------LLPS------HPL-----------------ELS-EK----N---FQLNQ-D-------KM
N
F
S
T
------------
L
-
R
N
I
Q
G
-------
L
FA-P--------
L
----------
K
L
Q
--
M
E
-
F
K
-----
A
--
V
Q
--
Q
------
V
Q
RLPFL----SS-------SN
L
S
-
L
-
D
V
L-RGNDET--I
G
F
E
D
IL--NDP
S
Q
S
-EVMGEP----
H
--
L
M
V
E
Y
KL-GLL
13
Fugue
61.99
22%
21
- C4 -
-
5MQR
6
?
A:
[26-1107]
DRIHYTGKELSNPTYHDGQLSPVVGVHNIQLVRANREHPEASNGNGWTYNHQPMLAYWNGQFYYQYLADPSDEHVPPSQTFLMTSKDGYQWTNPEIVFPPYKVPDGYTKESRPGMQAKDLIAIMHQRVGFYVSKSGRLITMGNYGVALDKKDDPNDGNGIGRVVREIKKDGSFGPIYFIYYNHGFNEKNTDYPYFKKSKDREFVKACQEILDNPLYMQWVEEADREDPIIPLKKGYKAFNCYTLPDGRIASLWKHALTSISEDGGHTWAEPVLRAKGFVNSNAKIWGQRLSDGTYATVYNPSEFRWPLAISLSKDGLEYTTLNLVHGEITPRMYGGNYKSYGPQPRGIQEGNGVPADGDLWVSYSVNKEDWIMSRIPVPVQINASAHADDDFSKSGSIAELTNWNIYSPVWAPVSLEGEWLKLQDKDPFDYAKV
E
R
K
I
P
A
S
--
K
----
E
L
K
-
V
S
------
F
---
D
L
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Q
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I
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Q
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E
N
-
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---
A
C
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R
L
-----
E
----------
L
T
P
D
------
G
I
F
-----------------
R
K
G
M
G
S
----
R
---
F
A
N
N
Y
M
E
AGKTYHV
E
A
V
L
S
T
------------
A
D
R
N
I
Q
V
-------
Y
V
D
-
G
--------
K
----------
R
V
G
--
L
R
-
F
Y
-----
A
MP
V
A
--
T
------
I
E
R
I
V
F
R
----
T
G
-------
E
R
T
F
M
P
-
T
V
D
-
T
P
A
D
Q
T
--
Y
D
L
P
D
A
-------------
G
G
Q
----
E
--
P
L
A
E
Y
R
I
-
A
N
V
15
Fugue
59.44
18%
14
- C4 -
-
2WY3
6
UL16P_HCMVA
B:
[1-137]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
D
L
G
--
S
----
K
S
S
-
N
S
------
T
CRL
N
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P
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Y
-----
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----------
N
V
T
E
------
D
E
I
-----------------
I
G
V
-
A
F
----
T
---
W
Q
H
N
E
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S
-------
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V
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L
W
L
------------
Y
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N
--
D
-------
T
V
I
-
R
--------
N
----------
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S
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--
I
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-
T
N
-----
I
--
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Q
--
D
------
G
L
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M
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----
P
V
-------
T
K
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Y
-
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M
-
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--
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D
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K
I
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E
-----
R
--
L
Y
V
R
L
G
S
-
L
Y
P
21
Fugue
55.89
20%
36
- C5 -
-
4D10
-
CSN7A_HUMAN
G:
[12-219]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGQNQEQFLLLAKSAKGAALATLIHQV
L
E
A
P
G
V
Y
VF
G
----
E
L
L
-
D
M
------
P
---
N
V
R
-
E
L
A
E
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D
F
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A
S
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F
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L
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L
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F
A
Y
---
G
T
Y
A
D
-----
Y
----------
L
A
E
A
------
R
N
L
PPLTEAQKNKLRHLSVV
T
L
A
-
A
K
VKCI
P
---
Y
A
V
L
L
-
E
-------
A
L
A
L
R
N
------------
V
-
R
Q
L
E
D
-------
L
V
I
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E
--------
A
----------
V
Y
A
DV
L
R
-
G
S
-----
L
--
D
Q
--
R
------
N
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R
L
E
V
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----
Y
S
IGRDIQR
Q
D
L
S
-
A
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A
R
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C
--
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C
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A
N
Q
----
H
--
K
E
Q
Q
L
G
L
-
K
Q
Q
2
PsiBlast_PDB
53.94
37%
0
- C- -
-
2ODR
-
SEPS_METMP
A:
[348-1951]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
N
D
R
N
V
A
--
S
----
M
V
K
L
D
K
------
V
---
P
V
M
-
D
--------
E
-
I
Y
D
L
-
T
K
E
-
L
I
E--
S
C
V
K
N
-----
K
----------
D
L
K
S
-------
P
C
-----------------
E
L
A
I
E
K
----
T
---
F
S
F
G
K
-
T
-------
K
K
N
-----------------------------------------------------------------------------------------------------------------------------------------------------------------
22
Fugue
52.00
10%
12
- C5 -
-
3E0H
-
?
A:
[6-158]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
F
V
C
E
--
L
----
K
E
L
-
A
P
------
V
---
P
A
L
-
L
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T
T
M
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L
-
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E
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G
Y
---
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D
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Q
-----
L
----------
L
A
G
Q
------
G
-
K
-----------------
S
P
S
-
G
P
----
P
---
F
A
R
Y
F
-
G
MSAG---
T
F
E
V
E
F
------------
G
-
F
P
V
E
G
GVEGSGR
V
V
T
-
G
--------
L
----------
T
P
S
--
G
K
-
A
A
-----
S
--
S
L
--
Y
------
I
G
P
Y
G
E
I
----
E
A
-------
V
Y
D
A
-
L
M
K
W
V
-
D
D
N
G
F
D
--
L
S
G
E
A
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E
--
I
Y
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D
N
P
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A
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A
P
D
----
Q
--
L
R
T
R
V
S
L
M
L
H
E
18
Fugue
51.97
14%
-16
- C5 -
-
1BOW
-
BMRR_BACSU
A:
[1-158]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
L
G
E
V
F
--
V
----
L
D
E
-
E
E
------
I
---
R
I
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A
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I
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G
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---
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K
-----
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N
------
N
S
Y
-----------------
G
A
T
F
S
F
----
Q
---
P
Y
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I
-
D
-------
E
M
T
Y
R
H
------------
I
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F
T
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V
--------
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I
S
-
S
--------
I
----------
T
P
D
--
M
E
-
I
T
-----
T
--
I
P
KG
R
------
Y
A
C
I
A
Y
N
----
F
S
-------
P
E
H
Y
-
F
-
L
N
L
-
Q
K
L
I
K
Y
--
I
A
D
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Q
L
T
--
V
V
S
D
V
Y
-
E
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I
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P
I
----
H
YE
Y
R
V
E
M
K
I
-
R
I
L
25
Fugue
51.43
20%
56
* C4 *
-
1DDT
-
?
?:
[381-535]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
P
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K
T
Q
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P
----
F
L
H
-
D
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------
Y
---
A
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-------
E
D
S
I
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I
R
T
-
G
F
---
Q
G
--------------------
E
S
G
------
H
D
I
-----------------
K
I
T
-
A
E
----
N
---
T
P
L
P
I
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A
-------
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V
L
L
P
T
------------
I
-
P
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KTHISVNG
R
----------
K
I
R
--
M
R
-
C
R
-----
A
--
I
D
--
G
DVTFC-
R
P
K
S
P
V
Y
VGNG
V
H
-------
A
N
L
H
-
V
-
A
F
H
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R
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E
K
--
I
H
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E
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----
S
S
D
S
I
-
G
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G
Y
Q
KTVD
H
--
T
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V
N
S
K
L
-
S
L
F
17
Fugue
49.66
16%
40
- C5 -
-
3MTV
-
?
A:
[1-203]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADVYDIGRGAVMYVAGGKVSWAPRGGNEVKFEPVP
K
E
L
K
L
V
A
--
N
----
R
L
H
-
T
S
FPPHHV
V
---
D
M
S
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K
F
T
F
I
T
P
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G
S
-
G
V
S
M
R
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E
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-
Q
Y
---
G
C
L
P
A
-----
D
TVPEGNCWWR
L
L
D
S
------
L
P
P
-----------------
E
V
Q
-
Y
K
----
E
---
I
R
H
A
N
-
Q
--------
F
G
Y
Q
T
------------
K
-
H
G
V
P
G
-------
K
Y
L
-
Q
--------
R
----------
R
L
Q
--
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R
-----
A
--
V
T
--
D
THGPIV
I
Q
Y
F
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----
E
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-------
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GF
E
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H
K
W
14
Fugue
47.40
18%
80
- C4 -
-
4HFS
-
YNCM_BACSU
A:
[10-212]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASELPNGIGGR
V
Y
L
N
S
T
G
--
A
----
V
F
T
-
A
K
------
I
---
V
L
P
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E
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K
N
N
D
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S
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Y
-
I
Y
S
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G
F
---
R
A
T
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TEADI
G
----------
L
Q
Y
S
KQYNVW
K
P
L
M----------------
K
V
G
-
S
K
----
N
EET
Y
I
E
G
K
-
D
-------
K
F
T
Y
N
K
GFRPGSTVQMTI
Y
-
K
N
L
S
G
-------
N
T
R
M
T
--------
L
WGTNNDGYTG
R
I
I
--
T
E
-
I
Q
GTNIG
T
--
I
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K
------
W
K
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A
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A
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A
V
-------
S
Y
E
S
-
Q
-
R
D
A
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I
K
A
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F
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--
T
S
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N
N
I
T
ID
N
K
A
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V
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D
----
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A
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V
A
G
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N
N
V
26
Fugue
39.16
7%
-39
* C6 *
-
2P0P
-
?
A:
[1-126]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
A
S
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D
--
E
----
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R
E
-
H
R
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I
---
E
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E
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A
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E
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Y
Y
L
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D
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E
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------
F
M
G
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K
W
K
-
K
K
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------
R
K
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-------
S
T
I
E
E
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T
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A
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--------
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----------
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C
L
--
K
D
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M
Y
-----
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--
E
V
--
A
------
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I
G
--------
G
K
-------
D
D
D
V
-
Y
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K
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A
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I
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-------
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D
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Q
-
E
A
I
A
D
W
----
L
--
Y
W
L
A
R
G
Y
-
K
F
-
27
Fugue
38.94
15%
-11
- C6 -
-
2O42
-
?
A:
[3-138]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
----
R
L
K
-
T
A
------
V
----
Y
D
-
Y
L
N
D
V
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I
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T
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L
S
---
N
C
C
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-----------------
F
I
N
E
------
T
Y
A
-----------------
K
N
Y
-
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L
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D
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------
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A
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L
----
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-------
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I
K
K
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K
I
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H
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D
----
A
A
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--
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G
I
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A
E
-
E
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K
K
C
K
Y
-
N
T
T
19
Fugue
36.80
12%
-21
- C5 -
-
2L6C
-
?
A:
[1-104]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
S
-
A
I
------
R
---
D
I
T
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M
A
H
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HKN
L
C
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H
C
-----
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----------
N
M
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------
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L
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-----------------
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F
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R
----
A
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P
Q
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A
I
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-------
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V
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A
------------
R
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P
E
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M
K
-------
E
L
--------------------------------------------
G
------
F
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P
------------------
T
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L
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F
I
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K
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A
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L
Y
A
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I
------------------
8
HHSearch
32.02
6%
-262
- C7 -
-
1BGF
-
STAT4_MOUSE
A:
[14-29]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
L
E
Q
------------
V
-
D
Q
F
Y
D
-------
D
N
F
-
P
--------
M
----------
E
-----------------------------------------------------------------------------------------------------------
7
HHSearch
29.43
13%
-214
- C7 -
-
4ZIA
-
STAT3_MOUSE
D:
[16-31]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
L
E
Q
------------
L
-
H
Q
L
Y
S
-------
D
S
F
-
P
--------
M
----------
E
-----------------------------------------------------------------------------------------------------------
11
HHSearch
28.80
18%
-9
* C9 *
-
5TS4
1
?
B:
[53-92]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
-----
E
----------
M
K
K
T
------
H
P
W
-----------------
E
V
R
-
V
E
----
R
---
Y
R
S
D
G
-
D
-------
R
F
E
I
E
L
------------
R
-
V
N
F
N
G
-------
K
T
F
-
R
--------
M
----------
E
I
----------------------------------------------------------------------------------------------------------
9
HHSearch
27.73
13%
-180
* C7 *
-
4ZIA
-
STAT3_MOUSE
A:
[16-31]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
L
E
Q
------------
L
-
H
Q
L
Y
S
-------
D
S
F
-
P
--------
M
----------
E
-----------------------------------------------------------------------------------------------------------
23
Fugue
25.86
11%
31
- C5 -
-
1BRM
-
DHAS_ECOLI
A:
[134-354]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NCTVSLMLMSLGGLFANDLVDWVSVATY
Q
A
A
S
G
G
G
--
A
RHMR
E
L
L
-
T
Q
------
M
---
G
H
L
-
Y
G
H
V
A
D
E
-
L
A
-
T
P
S
S
-
A
I
L
-
D
I
---
E
R
K
V
T
-----
T
----------
L
T
R
S
------
G
E
L
-----------------
P
V
D
-
N
F
----
G
---
V
P
L
A
G
-
S
-------
L
I
P
W
I
D
------------
W
-
K
G
Q
A
E
-------
T
N
K
-
I
--------
L
----------
N
T
S
--
S
V
-
I
P
-----
V
--
D
G
--
L
------
C
V
R
V
G
A
L
----
R
C
-------
H
S
Q
A
-
F
-
T
I
K
L
K
K
D
V
S
I
--
P
T
V
E
E
L
L
--
A
A
H
N
P
W
A
K
V
V
P
N
D
----
R
--
E
I
T
M
R
E
L
-
T
P
A
24
Fugue
25.42
26%
20
- C5 -
-
2LV6
-
B:
[1-26]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
--------
R
----------
R
W
K
--
K
N
-
F
I
-----
A
--
V
S
--
A
------
A
N
R
F
K
K
I
----
S
S
-------
S
G
A
L
-------------------------------------------------------
28
Fugue
24.95
26%
20
* C5 *
-
2BBM
-
B:
[1-26]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
--------
R
----------
R
W
K
--
K
N
-
F
I
-----
A
--
V
S
--
A
------
A
N
R
F
K
K
I
----
S
S
-------
S
G
A
L
-------------------------------------------------------
12
HHSearch
23.74
18%
-9
- C9 -
-
5TS4
-
?
A:
[53-92]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
-----
E
----------
M
K
K
T
--------------------------
E
V
R
-
V
E
----
R
---
Y
R
S
D
G
-
D
-------
R
F
E
I
E
L
------------
R
-
V
N
----------
K
T
F
-
R
--------
M
----------
E
I
----------------------------------------------------------------------------------------------------------