@TOME V3
(Feb 2022)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : new_query: (2019-03-29 )
EDCIVSLVPDGGSFARKTLRSSPGQQHDIQWGKYAFTIRVENGCAGKKTAGTIPPAHFVSVGRAAS
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10--.-----------------........20--.----------.-------..-.------------..----.-.30-------.------------.---.-....-----..40----.--.---.-------.....50......-------...60----.....--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDCIVSLVPD---G-----------------GSFARKTLR---S----------S-------PG-Q------------QH----D-IQ--------W------------G---K-YAFT-----IRVE----N--G---C-------AGKKTA-GTIPPA-------HFVSV----GRAAS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32
SP3
70.59
22%
103
- C11 -
-
1YN3
-
MAP_STAAM
A:
[157-254]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
S
T
V
P
Y
T
I
T
V
NGTS
Q
N
I
L
S
N
L
T
F
N
K
N
Q
N
I
S
-
Y
K
D
---
L
-----------------
E
G
K
V
K
S
V
L
E
---
S
----------
N
-------
R
G
I
T
------------
D
V
----
D
-
L
R
--------
L
------------
S
---
K
Q
A
K
Y
T
-----
V
N
F
K
----
N
--
G
---
T
K
K
V
I
D
LK
S
G
I
Y
T
A
-
N
L
I
N
S
S
-------
D
I
K
S
I
----
N
I
N
I
D
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36
Fugue
68.44
25%
64
- C10 -
3FC7
-
?
A:
[142-241]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDS
P
D
G
I
V
H
L
T
T
N
---
G
TILSVN
P
S
M
A
G
R
L
GADP
D
T
L
V
G
Q
Q
L
S
AVM
D
----------
S
-------
E
A
-
A
------------
N
Q
----
R
-
L
E
--------
A
------------
G
---
K
-
S
A
V
E
N
G
T
A
-
T
R
S
E
----
D
--
A
---
V
-------
G
G
R
H
Y
H
-
N
Q
Y
I
P
V
DSHRKSD
T
F
Q
L
V
----
S
R
D
I
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35
Fugue
64.60
18%
20
- C10 -
0.29
3C12
-
?
A:
[50-187]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DQVLKGAALVG
H
N
V
L
V
PSA
Q
V
A
I
D
AT
G
S
A
K
G
V
V
A
A
TS
A
G
F
V
N
F
E
I
T
D
A
---
N
-----------------
G
T
F
V
K
Q
L
S
V
---
P
----------
A
-------
S
A
-
A
G
-----------
E
V
----
S
-
F
A
--------
W
DGTDANGNRM
A
A
G
---
K
-
Y
G
I
T
-----
A
T
Q
T
----
D
--
T
---
A
-------
G
A
K
S
K
L
-
A
T
Y
V
D
A
-------
P
V
D
S
V
----
T
I
G
S
D
GLYLNLTGLGTSPLANVLRVS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37
Fugue
64.43
25%
12
- C6 -
-
5L9W
2
APCB_AROAE
C:
[1-127]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
Y
E
R
I
RFTEY
L
D
L
D
LNDEHWYC
H
D
C
G
T
K
L
I
S
A
---
R
-----------------
E
S
Y
K
K
G
C
L
V
---
A
----------
E
R
R
-----
P
H
-
E
------------
I
H
----
N
P
V
I
--------
E
------------
G
---
E
-
Y
S
F
A
PDENW
V
R
I
L
E
F
Y
C
P
--
G
---
C
-------
T
R
Q
I
E
T
-
E
Y
L
P
P
G
-------
H
P
I
T
V
----
D
I
E
V
D
I
D
S
L
K
A
R
L
K
K
GV
I
V
I
K
DG
K
L
T
K
PEAEV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29
SP3
61.62
22%
6
- C10 -
0.15
1H8L
1
CBPD_LOPSP
A:
[302-380]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
I
W
G
F
V
L
D
ATD
G
-----------------
R
G
I
L
N
A
T
I
----
S
----------
V
-------
A
D
-
I
------------
N
H
----
P
-
V
T
T
Y
KDG
D
Y
-
W
R
L
L
V
Q-------
G
---
T
-
Y
K
V
T
-----
A
S
A
R
-------
G
---
Y
-------
D
P
V
T
K
T
-
V
E
V
D
S
K
-------
G
G
V
Q
V
N
F
T
L
S
R
T
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41
Fugue
60.51
14%
53
* C10 *
0.34
5A6W
4
?
C:
[11-93]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAIDLSRERDPNFFDHPGIPV
P
E
C
F
W
F
M
F
K
N
---
N
-------------------
V
R
Q
D
A
G
T
---
C
----------
Y
-------
S
S
-
W
------------
K
M
----
D
-
M
K
--------
V
------------
G
---
P
-
N
W
V
H
-----
I
K
S
D
----
D
--
N
---
C
----------
N
L
S
-
G
D
F
P
P
G
-------
W
I
V
L
G
----
K
K
R
P
G
F-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
SP3
58.50
18%
49
- C10 -
-
1A62
-
?
?:
[48-125]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
I
F
G
D
G
V
L
E
I
L
Q
D
---
G
-----------------
F
G
F
L
R
S
A
D
S
---
S
YLAGPD
D
I
Y
V
S
-------
P
S
-
Q
I
R
----------
R
F
----
N
-
L
R
--------
T
------------
G
---
D
--
T
I
S
-----
G
K
I
R
----
P
--
P
---
K
-------
E
G
E
R
Y
F
-
A
L
L
----------
K
V
N
E
V
N---
F
D
K
P
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33
Fugue
58.21
20%
44
- C11 -
-
4CGY
-
TOP3A_HUMAN
A:
[22-640]
FS
R
A
A
M
E
M
A
L
RGVR
K
V
L
C
V
A
EK
N
D
A
A
K
G
I
A
D
L
L
S
N
GR
M
R
R
R
E
G
LSKF
N
K
I
Y
E
F
D
Y
H
L
YG
Q
N
V
T
M
V
M
T
S
V
SGHL
L
A
H
D
F
Q
MQFRKWQSCNPLVLFE
A
E
I
E
K
Y
C
P
ENF
V
D
I
K
K
T
L
E
R
E
T
R
Q
CQ
A
L
V
I
WTDCD
R
E
G
E
N
I
G
F
E
I
I
H
V
C
K
A
V
KPN
L
Q
V
L
R
A
R
F
SEIT
P
H
A
V
R
T
A
C
E
N
LTEPD
Q
R
V
S
D
A
V
D
V
R
Q
E
L
D
L
R
I
G
A
A
F
T
R
F
Q
T
L
R
L
Q
R
I
F
PEVLAEQLISYG
S
C
Q
F
P
T
L
G
F
V
V
E
R
F
K
A
I
Q
A
F
V
P
E
I
F
H
R
I
K
V
T
H
D
H
KD
G
I
V
E
F
N
W
KRHRLFN
H
T
A
C
L
V
L
Y
Q
L
C
V
E
DP
M
A
T
V
VEV
R
S
K
P
K
S
K
W
R
P
QALD
T
V
E
L
E
K
L
A
S
R
K
LRIN
A
K
E
T
M
R
I
A
E
K
L
Y
T
Q
GYISY
P
R
T
E
T
N
I
F
P
R
---
D
-----------------
L
N
L
T
V
L
V
E
Q
---
Q
----------
T
-------
P
---------------------
D
-
P
R
--------
W
------------
G
---
A
-
F
A
Q
S
-----
I
L
E
R
----
G
--
G
PTP
R
-------
N
G
N
K
S
D
-
Q
A
H
P
P
I
-------
H
P
T
K
Y
----
T
N
N
L
Q
G
D
E
Q
R
L
Y
E
F
I
V
R
H
F
L
A
C
C
S
Q
D
A
Q
G
Q
E
T
T
V
E
I
D
I
AQ
E
R
F
V
A
H
G
L
M
I
LAR
N
Y
L
D
V
Y
PY
D
H
W
S
D
KILPVYEQG
S
H
F
Q
P
STVEM
V
D
G
E
T
S
P
P
KLLT
E
A
D
L
I
A
L
M
E
K
H
GIGTDAT
H
A
E
H
I
E
T
I
K
A
R
MY
V
G
L
T
PDK
R
F
L
P
G
H
L
G
M
G
L
V
E
G
Y
D
S
MGYEMSKP
D
L
R
A
E
L
E
A
D
L
K
L
I
C
D
GKKD
K
F
V
V
L
R
Q
Q
V
Q
K
Y
K
Q
V
F
I
E
A
V
A
K
A
K
K
L
D
E
A
L
A
Q
Y
FGNGT
45
Fugue
55.37
25%
61
- C11 -
-
2SCU
1
SUCC_ECOLI
B:
[1-385]
----------------------------------------------------------------------------------------MNLH
E
Y
Q
A
K
Q
L
F
A
R
Y
G
L
P
A
P
V
G
Y
A
C
T
T
P
R
E
A
E
E
A
A
SKIGAGP
W
V
V
K
C
Q
V
HAGGRGKAGG
V
K
V
V
N
S
K
E
D
I
R
A
F
A
E
N
WLG
K
R
L
V
T
YQTDANGQPVN
Q
I
L
V
E
A
A
TDIA
K
E
L
Y
L
G
A
V
VDRSSRRV
V
F
M
A
S
TEGGVE
I
E
K
V
A
E
E
TPHL
I
H
K
V
A
L
D
PLTGPM
P
Y
Q
G
R
E
L
A
F
K
L
GLEG
K
L
V
Q
Q
F
T
K
I
F
M
G
L
A
T
I
F
L
E
R
DLA
L
I
E
INPLVITKQGDLICL
D
G
K
L
G
A
DGNALFRQ
P
D
L
R
E
M
RDQSQED
P
R
E
A
Q
A
A
Q
W
E
L
N
Y
V
A
L
D
G
N
I
G
C
M
V
N
---
G
-----------------
A
G
L
A
M
G
T
M
D
---
I
----------
V
-------
K
L
-
H
------------
G
G
----
E
-------------------------------------------------------------------------
P
A
-------
N
F
L
D
V
----
G
G
G
A
T
K
E
R
V
T
E
A
F
K
I
I
L
SDDKVK
A
V
L
V
N
I
F
G
GIVR
C
D
L
I
A
D
G
I
I
G
A
V
A
E
V
GVN
V
P
V
V
V
R
L
E
G
NN
A
E
L
G
A
K
K
L
A
D
SGLN
I
I
A
A
KG
L
T
D
A
A
Q
Q
V
V
A
A
V-------------------------------------------------------------------------------------------------------------------------
28
SP3
50.71
18%
33
- C10 -
0.30
1FVQ
-
ATU2_YEAST
A:
[1-72]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
R
E
V
I
L
A
V
H
---
G
MTC
S
A
C
-----------
T
N
T
I
N
T
Q
L
R
---
A
----------
L
-------
K
G
V
T
------------
K
C
----
D
-
I
S
--------
L
------------
V
---
T
-
N
E
C
Q
-----
V
T
Y
D
--------------------
N
E
V
T
A
-
D
S
I
-
K
E
-------
I
I
E
D
C
----
G
F
D
C
E
I
LRDS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
SP3
49.64
22%
11
- C9 -
-
1KN7
-
KCNA4_RAT
A:
[1-75]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
E
V
A
M
V
S
A
E
S
S
---
G
CNSHMPY----------
G
Y
A
A
Q
A
R
A
R
---
E
----------
R
-------
E
R
-
L
------------
A
H
----
S
--
R
--------
A
------------
A
---
A
-
A
A
A
V
-----
A
A
A
T
----
A
--
A
---
V
-------
E
G
T
G
G
S
-
G
G
G
P
H
H
-------
H
H
Q
T
R
----
G
A
Y
S
S
HD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
40
Fugue
49.11
12%
34
- C10 -
0.36
1GH8
-
EF1B_METTH
A:
[1-89]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MG
D
V
V
A
T
I
K
V
M
P
E
---
S
-----------------
P
D
V
D
L
E
A
L
K
---
K
----------
E
-------
I
Q
-
E
R
IPEG
T
E
L
H
K
ID
E
E
----
P
-
I
A
--------
F
------------
G
---
L
-
V
A
L
N
-----
V
M
V
V
V
G
D-
A
--
E
---
G
-------
G
T
E
A
A
E
-
E
S
L
S
G
I
-------
E
G
V
S
N
----
I
E
V
T
D
VRRLM---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30
SP3
48.31
13%
-19
- C10 -
0.33
1FNH
-
A:
[3-92]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAPTDLKFTQVTPT
S
L
S
A
Q
W
T
P
PNVQL
T
G
Y
R
V
R
V
T
P
K
---
E
-----------------
K
T
G
P
M
K
E
I
N
---
L
----------
A
-------
P
D
-
S
------------
S
S
V
V
V
S
G
-
L
M
--------
V
------------
A
T
--
K
-
Y
E
V
S
-----
V
Y
A
L
----
K
--
D
----------------
T
-
L
T
S
R
P
A
Q
G
-----
V
V
T
T
L
----
E
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34
Fugue
46.90
21%
-73
- C11 -
-
3J2P
-
?
B:
[1-72]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
V
A
L
V
P
H
V
G
M
---
G
-----------------
L
E
T
A
T
E
T
W
M
---
S
----------
S
-------
E
G
-
A
------------
W
K
----
H
-
A
Q
--------
R
------------
I
---
E
-
T
W
I
L
-----
R
H
P
G
----
F
--
T
---
I
-------
M
A
A
I
L
A
-
Y
T
I
G
T
T
-------
H
F
Q
R
A
----
L
I
F
I
L
L
T
A
V
A
P--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
39
Fugue
46.32
19%
33
- C8 -
-
1XBR
-
TBXT_XENLA
A:
[1-184]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E
L
K
V
S
L
E
E
R
D
L
W
T
R
F
K
E
L
T
N
E
M
I
V
T
KN
G
R
R
M
F
PV
L
K
V
S
M
S
GLDPN
A
M
Y
T
V
L
L
D
F
V
AADN
H
R
W
K
Y
V
NG
E
W
V
P
G
G
K
P
E
P
Q
A
P
S
C
V
Y
I
HPDS
P
N
F
G
A
H
W
M
K
D
---
P
-----------------
V
S
F
S
K
V
K
L
T
---
N
----------
K
-------
M
N
-
G
------------
G
G
----
Q
-
I
M
--------
L
------------
N
S
L
H
K
-
Y
E
P
R
-----
I
H
I
V
----
R
V
G
G
---
T
-------
Q
R
M
I
T
S
-
H
S
F
P
E
T
-------
Q
F
I
A
V
----
T
A
Y
Q
N
E
E
I
T
A
L
K
I
K
H
NPFA
K
A
F
L
D
A
K
E
R
N--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
HHSearch
44.40
29%
-109
* C13 *
-
2XTD
-
TBL1X_HUMAN
A:
[24-52]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
A
F
T
-----
F
G
I
E
----
S
--
H
---
I
-------
S
Q
S
N
I
N
G
T
L
V
P
P
A
-------
A
L
I
S
I
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
HHSearch
42.91
19%
-297
- C14 -
-
5BO0
-
ASF1B_HUMAN
D:
[65-91]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
P
--------
A
------------
G
---
R
-
H
M
F
V
-----
F
Q
A
D
----
A
----------------
P
N
P
--
S
L
I
P
E
T
-------
D
A
V
G
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
HHSearch
42.36
27%
78
- C10 -
0.35
5I0V
-
?
A:
[71-123]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
L
K
N
T
---
D
T----------------
G
A
I
K
R
G
T
L
M
---
P
----------
M
V
A
DD
G
P
H
Y
G
-
A
------------
N
I
----
A
-
M
E
KDKKGGF
G
V
------------
G
---
N
-
Y
E
L
T
-----
F
Y
I
S
----
N
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
HHSearch
41.33
27%
77
- C10 -
0.29
3LZQ
-
?
B:
[71-123]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
L
K
N
T
---
D
T----------------
G
A
I
K
R
G
T
L
M
---
P
----------
M
V
A
DD
G
P
H
Y
G
-
A
------------
N
I
----
A
-
M
E
KDKKGGFG
V
------------
G
---
N
-
Y
E
L
T
-----
F
Y
I
S
----
N
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
SP3
41.21
15%
-142
- C11 -
-
1P65
-
?
A:
[11-67]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
V
R
H
H
F
T
P
S
---
E
-----------------
R
Q
L
C
L
S
S
I
Q
---
T
----------
A
-------
F
N
-
Q
-------------------------------------------
G
---
A
-
G
T
C
T
-----
L
-
S
D
----
S
--
G
---
R
-------
I
S
Y
T
V
E
-
F
S
L
P
T
H
-------
H
T
V
R
L
----
I
R
V
T
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------