@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : G17_113040T0_kcl15: (2019-03-29 )
GFVNFFKKKASSSTPPPAECEYTVYRNQETDARRRKHSQEGTYSFSHQGKAAKNSKQNILGVKVRFDRECQPHYSSKNQ
Atome Classification :
(20 SA)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....-.....10..-.-.------------....20....-.----...30--...--.....--------.40---.-.--------.---...----...50..-----..---.--.-.--------.--60---.-.-------------.....---..70.....-----....------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
F
V
N
-
F
F
K
K
KASSS-T-P------------PPAE
C
E
Y
T
V
Y
-R----NQE
T
---
D
A
R
--
R
RKHS--------QE----G-
T
--------
Y
---SFS----HQGKAAK-----NS---K--Q-
N
--------
I
--
L
----
G
-
V
-------------
K
V
R
FD---REC-QPHYS-----SKNQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
54
SP3
73.48
24%
11
- C3 -
-
1C01
-
AMP1_MACIN
A:
[1-76]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
A
F
T
V
W
-
S
----
G
P
G
C
---
N
N
R
--
A
E
R
Y
S
KC
G
C
S
A
I
H
Q
K
----
G
-
G
--------
Y
---
D
F
S
----
Y
T
G
Q
T
A
A
-----
L
Y
---
N
--
Q
A
G
--------
C
--
S
----
G
V
A
-------------
H
T
R
F
G
SSA
R
A
C
-
N
P
-
F
G
-----
W
K
S
I
F
I
Q
C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
72.93
26%
12
- C11 -
0.35
3BSQ
-
KLK7_HUMAN
A:
[46-110]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
Y
T
V
H
-
L
----
G
S
D
T
---
L
G
D
--
R
R
A
Q
R
--------
I
K
----
A
-
S
--------
K
---
S
F
R
----
H
P
G
Y
S
T
Q
-----
T
H
---
V
--
N
-
D
--------
L
--
M
----
L
-
V
K
L
N
S
Q
A
R
L
S
SM
V
K
K
V
R
L
P
---
S
R
C
-
E
P
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
72.67
26%
26
- C11 -
0.31
5Y9L
1
KLK7_HUMAN
A:
[46-110]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
Y
T
V
H
-
L
----
G
S
D
T
---
L
G
D
--
R
R
A
Q
R
--------
I
K
----
A
-
S
--------
K
---
S
F
R
----
H
P
G
Y
S
T
Q
-----
T
H
---
V
--
N
-
D
--------
L
--
M
----
L
-
V
K
L
NSQARLSSM
V
K
K
V
R
L
P
---
S
R
C
-
E
P
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
72.01
26%
25
- C11 -
0.31
5YJK
1
KLK7_HUMAN
A:
[46-110]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
Y
T
V
H
-
L
----
G
S
D
T
---
L
G
D
--
R
R
A
Q
R
--------
I
K
----
A
-
S
--------
K
---
S
F
R
----
H
P
G
Y
S
T
Q
-----
T
H
---
V
--
N
-
D
--------
L
--
M
----
L
-
V
K
L
NSQARLSSM
V
K
K
V
R
L
P
---
S
R
C
-
E
P
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
71.59
26%
38
- C11 -
0.39
2QXG
1
KLK7_HUMAN
A:
[46-110]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
Y
T
V
H
-
L
----
G
S
D
T
---
L
G
D
--
R
R
A
Q
R
--------
I
K
----
A
-
S
--------
K
---
S
F
R
----
H
P
G
Y
S
T
Q
-----
T
H
---
V
--
N
-
D
--------
L
--
M
----
L
-
V
K
L
NSQARLSSM
V
K
K
V
R
L
P
---
S
R
C
-
E
P
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
71.00
26%
20
* C11 *
0.30
2QXJ
1
KLK7_HUMAN
A:
[46-110]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
Y
T
V
H
-
L
----
G
S
D
T
---
L
G
D
--
R
R
A
Q
R
--------
I
K
----
A
-
S
--------
K
---
S
F
R
----
H
P
G
Y
S
T
Q
-----
T
H
---
V
--
N
-
D
--------
L
--
M
----
L
-
V
K
L
N
S
Q
A
R
L
S
SM
V
K
K
V
R
L
P
---
S
R
C
-
E
P
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
70.80
26%
28
- C11 -
5FAH
-
KLK7_HUMAN
A:
[46-116]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
Y
T
V
H
-
L
----
G
S
D
T
---
L
G
D
--
R
R
A
Q
R
--------
I
K
----
A
-
S
--------
K
---
S
F
R
----
H
P
G
Y
S
T
Q
-----
T
H
---
V
--
N
-
D
--------
L
--
M
----
L
-
V
K
L
NSQARLSSM
V
K
K
V
R
L
P
---
S
R
C
-
E
P
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
70.65
26%
32
- C11 -
0.26
2QXH
1
KLK7_HUMAN
A:
[46-110]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
Y
T
V
H
-
L
----
G
S
D
T
---
L
G
D
--
R
R
A
Q
R
--------
I
K
----
A
-
S
--------
K
---
S
F
R
----
H
P
G
Y
S
T
Q
-----
T
H
---
V
--
N
-
D
--------
L
--
M
----
L
-
V
K
L
N
S
Q
A
R
L
S
SM
V
K
K
V
R
L
P
---
S
R
C
-
E
P
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
70.18
26%
18
- C11 -
0.28
2QXI
1
KLK7_HUMAN
A:
[46-110]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
Y
T
V
H
-
L
----
G
S
D
T
---
L
G
D
--
R
R
A
Q
R
--------
I
K
----
A
-
S
--------
K
---
S
F
R
----
H
P
G
Y
S
T
Q
-----
T
H
---
V
--
N
-
D
--------
L
--
M
----
L
-
V
K
L
NSQARLSSM
V
K
K
V
R
L
P
---
S
R
C
-
E
P
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
Fugue
69.35
21%
184
- C5 -
-
4QLA
1
HYEP_BOMMO
A:
[19-442]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDLEEWWGPPELKQKQDT
S
I
K
P
F
E
I
T
FS
E
T
M
V
K
-
E
L
K
E
R
I
K
K
R
-
R
-
P
------------
F
A
P
P
L
E
G
V
G
F
-
K
YGFN
S
K
Q
L
---
D
S
W
--
L
K
Y
W
A
--------
E
E
---------------
Y
---
P
F
A
----
E
R
Q
K
F
L
N
-----
Q
Y
P
H
F
K
--
T
-
N
--------
I
--
Q
----
G
-
L
-------------
N
I
H
F
M
---
R
I
--
T
P
K
V
P
-----
K
G
V
E
I
V
P
L
L
L
L
H
G
W
PGSVREFYEA
I
P
H
L
T
AVSKDRN
F
A
L
E
I
I
A
P
S
L
PGYGF
S
D
A
A
VRPGLA
A
A
E
V
A
V
I
F
K
N
L
M
A
R
L
GYK
Q
Y
Y
V
Q
G
G
D
W
G
A
L
I
G
S
A
M
A
T
F
FPKEII
G
F
H
S
N
M
A
L
T
LS
P
A
A
T
F
L
E
F
V
G
A
L
FPSLIVEPELANRLYP
L
S
E
K
Y
S
T
L
L
E
E
L
G
Y
M
H
I
Q
A
TK
P
D
T
V
G
I
G
L
T
D
S
P
A
G
L
L
A
Y
I
L
E
K
F
S
TWTNPDLRSKEDGGLSYRWT
K
D
Q
L
I
D
N
L
M
L
Y
W
S
T
KS
I
V
T
S
M
R
L
Y
A
E
S
F
S
S
R
H
F
D
LKLDEIQVQ
V
P
T
W
V
L
Q
A
KHEL
A
Y
Q
P
P
C
I
L
K
M
K
Y
PKLV
N
A
S
V
I
EDGGHFLAFEL
P
E
I
F
A
K
D
V
L
K
A
I
G
E
F
R
K
L
K
N
13
Fugue
68.93
18%
37
* C12 *
-
1W8X
-
VP30_BPPRD
M:
[1-83]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
L
I
N
P
Q
F
P
Y
A
G
P
V
P
-
I
-
P
------------
G
P
A
P
T
E
T
M
P
L
-
L
----
N
Y
R
V
---
E
G
R
--
I
A
G
I
Q
--------
Q
A
----
R
-
Q
--------
F
---
M
P
F
----
L
Q
G
P
H
R
A
-----
V
A
---
E
--
Q
-
T
--------
Y
HA
I
----
G
-
T
-------------
G
I
Q
M
G
---
Q
T
F
N
Q
P
L
I
N
-----
T
Q
E
G
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
51
SP3
66.66
18%
37
- C12 -
-
1W8X
-
VP30_BPPRD
M:
[1-83]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
L
I
N
P
Q
F
P
Y
A
G
P
V
P
-
I
-
P
------------
G
P
A
P
T
E
T
M
P
L
-
L
----
N
Y
R
V
---
E
G
R
--
I
A
G
I
Q
--------
Q
A
----
R
-
Q
--------
F
---
M
P
F
----
L
Q
G
P
H
R
A
-----
V
A
---
E
--
Q
-
T
--------
Y
--
H
AIGT
G
-
I
-------------
Q
M
G
-
Q
---
T
F
N
-
Q
P
L
I
N
-----
T
Q
E
G
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
Fugue
57.80
16%
7
- C5 -
-
3RLB
8
?
A:
[17-192]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N
V
R
L
L
T
E
I
A
F
M
A
A
L
A
F
I
I
S
L
IPNTVYGWIIVEIAC
I
P
I
L
L
L
S
L
R
RG
L
T
A
G
L
V
G
G
L
I
W
G
I
L
S
-
M
I
T
G
H
A
Y
I
L
-
S
-
L
------------
S
Q
A
F
L
E
Y
L
V
A
-
P
----
V
S
L
G
---
I
A
G
--
L
F
R
Q
K
--------
T
A
----
P
---------------------------
L
-----
K
L
---
A
--
P
-
V
--------
L
--
L
----
G
-
T
-------------
F
V
A
V
L
---
L
K
Y
-
F
F
H
F
I
-----
A
G
I
I
FWSQYAWKGWG
A
V
A
Y
S
L
A
V
N
G
I
S
G
I
L
T
A
I
A
A
F
V
I
L
I
I
F
V
K
K
F
P
K
L
F
I
HSNY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
Fugue
56.14
20%
-
- C5 -
-
4HZ9
-
?
C:
[30-151]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NSPEAAAI
S
F
Y
T
-
W
F
I
Q
H
D
S
D
Q
-
T
-
Y
------------
P
L
S
E
P
D
I
E
R
Y
V
A
----
T
D
T
V
---
G
R
L
--
R
N
D
Y
A
--------
H
A
----
G
-
P
-------------------------
P
-----
N
G
---
V
--
D
-
Y
--------
F
--
L
----
K
-
V
-------------
Q
D
Y
D
S
---
R
D
W
-
L
A
H
I
Q
-----
V
Q
R
A
LMLGDVAVVPVSFGSQDPVHVLVFLKRVDATWKIIKIDDTWEYR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
55.78
30%
46
- C5 -
-
2PPY
-
?
A:
[187-238]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
F
-
P
----
Q
A
E
T
---
R
E
R
--
T
R
E
Y
A
--------
R
K
L
A
N
S
A
-
T
--------
Y
---
A
V
S
----
N
I
K
L
A
I
M
-----
N
G
---
K
--
E
-
M
--------
P
--
L
----
N
-
V
-------------
A
I
R
Y
E
---
G
E
L
-
Q
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
Fugue
53.32
22%
-
- C- -
-
4HWM
-
?
A:
[21-137]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRYEDV
V
K
A
P
APA
G
L
A
G
-
F
W
Q
T
K
G
P
Q
S
-
A
M
S
------------
P
D
A
I
A
S
L
I
V
T
-
K
----
E
G
D
T
F
--
D
C
R
Q
W
Q
R
V
I
A
--------
Q
P
----
G
-
K
L
M
N
R
D
SE
I
Y
---
N
V
T
----
A
S
L
D
I
Y
P
-----
V
E
---
R
--
E
-
G
NT
I
S
Y
D
RM
T
--
L
----
S
-
R
-------------
V
E
R
L
T
---
P
E
C
-
E
K
A
W
A
-----
K
A
R
A
T
G
PV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
Fugue
52.44
16%
-
- C5 -
-
4NOM
-
LGMN_MOUSE
A:
[26-432]
EDG
G
K
H
W
V
V
I
V
A
GSNGWYNY
R
H
Q
A
D
A
C
H
A
Y
Q
I
I
H
R
N
GIPDEQ
I
I
V
M
M
YDDIANSEENPTPGVVINRPNGTDVYKGVLKDYTGEDVT
P
E
N
F
L
A
V
L
R
GDAEAVKGKGSGKVLKSGPR
D
H
V
F
I
Y
F
T
D
H
G
A
TG
I
L
V
F
PN
D
D
L
H
V
K
D
L
N
K
T
I
R
Y
M
Y
E
H
KMYQ
K
M
V
F
Y
I
E
A
C
ESGSMMNHLPDDIN
V
Y
A
T
T
AANPK
E
S
S
Y
A
C
YYDEERGTYLGD
W
Y
S
V
N
W
M
E
D
S
D
V
EDLTKET
L
H
K
Q
Y
H
L
V
K
S
H
TNT
S
H
V
M
Q
Y
G
N
K
S
I
S
T
M
K
V
M
Q
-
F
Q
G
M
K
H
R
A
S
-
S
-
P
I
S
L
P
P
VTHLDLT
P
S
P
D
V
P
L
T
I
L
-
K
----
R
K
L
L
R
T
N
D
V
K
--
E
S
Q
N
L
--------
I
G
----
Q
-
I
--------
Q
---
Q
F
L
----
D
A
R
H
V
I
E
-----
K
S
---
V
--
H
-
K
--------
I
--
V
----
S
-
L
-------------
L
A
G
F
G
---
E
T
A
-
E
R
H
L
S
-----
E
R
T
M
LTA
H
D
C
Y
Q
E
A
V
T
H
F
R
T
HCFNWHSVTYEHALRY
L
Y
V
L
A
N
L
C
E
A
PYP
I
D
R
I
E
M
A
M
D
K
V
CL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
48
SP3
51.82
20%
166
* C6 *
-
1BHT
-
HGF_HUMAN
A:
[1-92]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RR
N
T
I
H
-
E
F
K
K
S
A
K
T
T
L
I
-
K
------------
I
D
P
A
L
K
I
K
T
K
-
K
----
V
N
T
A
---
D
Q
C
--
A
N
R
C
T
--------
R
N
----
K
-
G
--------
L
---
P
F
T
CK
A
F
V
F
D
K
A
R
K
Q
C
L
W
F
P
F
---
N
--
S
-
M
--------
S
--
S
----
G
-
V
-------------
K
K
E
F
G
---
H
E
F
-
D
-
L
Y
E
-----
N
K
D
Y
IR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
47
SP3
51.68
12%
-9
- C2 -
-
1HPI
1
?
?:
[1-71]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
E
R
L
S
E
D
-
D
-
P
------------
A
A
Q
A
L
E
Y
---------
R
H
D
A
---
S
S
V
--
Q
H
P
A
Y
--------
E
E
----
G
-
Q
--------
T
CLN
C
L
L
----
Y
T
D
A
S
A
Q
-----
D
W
---
G
P
C
S
-
V
--------
F
--
P
----
G
-
K
-------------
L
V
S
A
N
---
G
W
C
-
T
-
A
W
V
-----
A
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
50
SP3
51.58
17%
138
- C5 -
-
1M4V
-
?
A:
[5-100]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKYEN
V
T
K
D
-
I
F
D
L
R
D
Y
Y
S
-
G
-
A
------------
S
K
E
L
K
N
V
T
G
Y
-
R
----
Y
S
K
G
---
G
K
H
--
Y
L
I
F
D
--------
K
H
----
Q
K
F
--------
T
---
R
I
Q
----
I
F
G
K
D
I
E
-----
R
L
---
K
--
T
-
R
K-------
N
--
P
----
G
-
L
-------------
D
I
F
V
V
---
K
E
A
-
E
T
V
F
S
Y
G
G
V
T
K
K
N
Q
G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------