@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : G22_056230T0_kcl33: (2019-03-29 )
RLCTVQIMRDDYVHPVAYKKIEFPGPTTKPFQFKWEIRGVTYNVQVLYEKCAAKIYQEPALPDGLIIKGH
Atome Classification :
(20 SA)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10-----------..-....--...20.-----.----..---.-----.-.------------.30..---.------..---....---40..-.----...-------..50....--..----..--60--.-------------...--.....70-----------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------R
L
C
T
V
Q
I
MRD------------DY-VHP
V
--
A
Y
K
K
IE-----F----PG---P-----T-T------------K
P
-
F
Q
---
F
------
K
W
---
E
IR
G
---
V
T
Y
N
-
V
----
Q
V
L
-------
Y
E
K
C
A
A
K
I
--
Y
Q----EP--A---L-------------PD
G
--
L
I
IKGH------------------------------------------------------------------------------------------------------------------------
31
SP3
75.76
15%
0
- C- -
-
1FJG
-
RS18_THET8
R:
[16-88]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PSRKAKV
K
A
T
L
G
E
F
D
L
R
------------
D
Y
-
R
N
V
E
--
V
L
K
R
-------
F
----
L
S
---
E
-----
T
-
G
------------
K
I
-
L
P
---
R
------
R
-----
R
T
G
---
L
S
G
K
-
E
----
Q
R
I
-------
L
A
K
T
I
K
R
A
--
R
I
----
L
G
--
L
---
L
-------------
P
-----
F
T
E
K
L
VRK---------------------------------------------------------------------------------------------------------------------
16
Fugue
72.40
19%
-48
- C4 -
0.40
4OU6
-
DNAT_ECOLI
A:
[1-76]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V
P
M
G
K
F
A
M
Y
P
D
WQPDA-------
D
F
-
I
R
L
A
--
A
L
W
G
V
A
-----
L
----
R
E
---
P
-----
V
-
T
T
E
E
L
--------
A
S
-
F
I
---
A
------
Y
W
---
Q
A
E
G
---
K
V
F
H
-
H
----
V
Q
W
-------
Q
Q
K
L
A
R
S
L
--
Q
I
----
G
R
--
A
---
S
-------------
N
G
G
--
L
P
----------------------------------------------------------------------------------------------------------------------------
2
Fugue
70.35
21%
-29
- C4 -
0.45
2KL8
-
?
A:
[1-85]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
E
M
D
I
R
F
R
G
D
------------
D
L
E
A
F
E
K
--
A
L
K
E
M
I
R
Q
A
R
K
F
----
A
G
---
T
-----
V
-
T
------------
Y
T
-
L
D
GN
D
L
------
E
I
---
R
I
T
G
---
V
P
E
Q
-
V
----
R
K
E
-------
L
A
K
E
A
E
R
L
--
A
K
----
E
F
--
N
---
I
-------------
T
V
T
--
Y
T
I
R
L
E
HHHHHH------------------------------------------------------------------------------------------------------------------
8
Fugue
62.10
24%
-23
- C5 -
-
4BZ2
1
?
A:
[1-101]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VE
F
K
R
M
C
S
G
K
F
S
I
D
KE
M
A
--------
E
T
-
Q
H
G
T
--
T
V
V
K
V
K
-----
Y
----
E
G
AGA
P
-----
C
-
K
------------
V
P
-
I
E
---
I
R
D
VNKE
K
V
---
V
G
R
I
---
I
S
S
T
-
P
----
F
A
E
-------
Y
T
N
S
V
T
N
I
--
E
L
----
E
P
--
P
---
F
-------------
G
D
S
--
Y
I
V
I
G
V
GDS
A
L
T
L
H
W
F
R
K
H
H----------------------------------------------------------------------------------------------------------
34
SP3
54.63
18%
14
- C5 -
-
1WM2
-
SUMO2_HUMAN
A:
[12-89]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TEN
N
D
H
I
N
L
K
V
A
G
Q
------------
D
G
-
S
--
V
--
V
Q
F
K
I
K
-----
R
----
H
T
---
P
-----
L
-
S
------------
K
L
-
M
K
---
A
------
Y
C
---
E
R
Q
G
---
L
S
M
R
Q
I
----
R
F
R
-------
F
D
--
G
Q
P
I
N
E
T
D
----
T
P
--
A
QLE
M
-------------
E
D
E
--
D
T
I
D
V
F
Q
Q----------------------------------------------------------------------------------------------------------------------
7
Fugue
53.40
19%
49
- C4 -
0.20
5J1B
-
SMI1_YEAST
A:
[12-275]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NDG
V
S
E
T
L
L
A
W
R
H
I
D
F
W
T
S
E
HN
P
D
L
N
A
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LS
D
P
C
T
----
Q
N
------------
D
I
-
T
H
A
E
--
E
D
L
E
V
S
-----
F
----
P
N
---
P
-----
V
-
K
------------
A
S
-
F
K
---
I
------
H
D
GQE
D
T
S
G
---
L
F
Y
G
-
F
----
Q
L
M
T------
L
D
Q
V
V
A
M
T
--
Q
A
----
W
R
--
N
---
V
-------------
A
K
N
--
L
N
K
R
S
P
D
Q
K
S
IPPNAVQPVYAHPAWIPLITDNAG
N
H
I
G
V
D
LAPGPNGKYAQ
I
I
T
F
G
RDFDTKFVIAEN
W
G
E
F
L
L
S
F
A
N
D
L
E
A
GNWYLVD
G
E
L
V
F
R
D
KKSNGPIQD
Y
F
E
V
L
K
R
R
T
W
I
K
Y
Q
L
E
RPHRD
9
Fugue
53.16
18%
9
- C4 -
0.55
1RL6
-
RL6_GEOSE
A:
[82-170]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
E
K
A
L
E
L
V
G
V
------------
G
Y
-
R
A
S
K
--
Q
G
K
K
L
V
-----
L
SVGY
S
H
---
P
-----
V
-
E
------------
I
E
-
P
E
---
E
------
G
L
---
E
I
E
V
---
P
S
Q
T
-
K
----
I
I
V
K
G
AD
K
Q
R
V
G
E
L
A
A
N
I
--
R
A
V
RPP
E
P
--
Y
---
K
-------------
G
K
G
--
I
R
Y
E
G
E
LVRL--------------------------------------------------------------------------------------------------------------------
1
Fugue
50.28
12%
-130
- C5 -
-
2MM2
-
?
A:
[1-65]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
C
T
A
N
I
L
N
----------------
I
N
E
V
--
V
I
A
T
G
C
-----
V
----
P
A
---
G
-----
G
-
N
------------
L
I
-
I
R
---
V
------
G
------
S
D
---
H
S
Y
L
-
I
----
R
A
--------
T
V
S
C
G
L
S
L
--
N
P
----
S
Q
--
S
---
F
-------------
I
N
G
--
E
S
L
A
S
G
G
R
C---------------------------------------------------------------------------------------------------------------------
29
SP3
49.72
17%
-71
* C5 *
-
1E0B
1
SWI6_SCHPO
A:
[2-62]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
V
E
N
Y
------------
D
S
-
W
E
D
L
VS
S
I
D
T
I
E
-----
R
----
K
D
---
D
-----
G
-
T
------------
L
E
-
I
Y
---
L
------
T
W
---
K
-
N
G
A
I
-
S
H
H
P
-
S
----
T
I
T
-------
N
K
K
C
P
Q
K
M
--
L
Q
--------------------------------
F
Y
E
S
H
L-----------------------------------------------------------------------------------------------------------------------
33
SP3
45.82
14%
108
- C4 -
0.11
1VZS
-
ATP5J_BOVIN
A:
[1-76]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NK
E
L
D
P
V
Q
K
L
F
V
------------
D
K
-
I
R
E
Y
--
R
T
K
R
Q
T
-----
S
----
G
G
---
P
-----
V
-
D
------------
A
G
-
P
E
---
Y
------
Q
Q
---
D
L
D
R
---
E
L
F
K
-
L
----
K
Q
M
-------
Y
G
K
A
D
M
N
T
--
F
P
----
N
F
--
T
---
F
-------------
E
D
P
--
K
F
E
V
V
E
KPQS--------------------------------------------------------------------------------------------------------------------
35
SP3
45.41
15%
-122
- C5 -
-
1H8P
1
SFP1_BOVIN
A:
[22-67]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
------------
E
C
-
V
F
P
F
--
V
Y
R
N
R
K
-----
H
----
F
D
---
C
-----
T
-
V
------------
H
G
-
S
L
---
F
------
P
W
---
C
S
L
D
---
A
D
Y
V
-
G
----
R
W
K
-------
Y
--
C
A
Q
R
D
--
Y
A
-------------------------------------------------------------------------------------------------------------------------------------------------------------
30
SP3
45.28
15%
44
- C5 -
-
1TVX
-
CXCL7_HUMAN
A:
[23-86]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
R
C
L
C
I
K
T
T
------------
S
G
-
I
H
P
K
--
N
I
Q
S
L
E
-----
V
I
G
--
K
G
---
T
-----
H
C
N
------------
Q
V
-
E
V
---
I
------
A
T
---
L
K
D
G
R
K
-
I
C
L
D
-
P
----
D
----------
A
P
R
I
K
K
I
--
V
Q
----
K
---------------------------
K
L
A
G
D
------------------------------------------------------------------------------------------------------------------------
28
SP3
44.90
11%
69
- C4 -
0.38
1DI2
-
PRKAB_XENLA
A:
[1-69]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
P
V
G
S
L
--
Q
E
L
A
V
Q
------------
K
G
-
W
R
L
P
--
E
Y
T
V
A
Q
-----
E
----
S
G
---
P
-----
P
-
H
------------
K
R
E
F
T
---
I
------
T
C
---
R
V
E
T
---
F
V
E
T
-
G
S
GTS
K
Q
V
-------
A
K
R
V
A
A
E
K
--
L
L
----
T
---
K
---
F
-------------
K
T
---------------------------------------------------------------------------------------------------------------------------------
37
SP3
44.61
12%
-23
- C5 -
-
1N7E
-
GRIP1_RAT
A:
[667-761]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
A
I
I
Y
T
V
E
L
K
R
Y
GGPLG
I
T
I
S
G
T
E
E
P
-
F
D
P
I
--
I
I
S
S
L
T
-----
K
----
G
G
---
L
A
E
R
T
G
A
-
I
------------
H
I
-
G
D
---
R
------
I
L
---
A
I
N
S
---
S
--
S
-
L
----
K
G
K
-------
P
L
S
E
A
I
H
L
--
L
Q
----
M
A
--------------------
G
E
T
--
V
T
L
K
I
K
K
Q
T
D
A
Q
P
A
S
S--------------------------------------------------------------------------------------------------------------
32
SP3
43.35
15%
58
* C4 *
0.11
1G4D
-
REPC_BPMU
A:
[1-69]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
S
------------
I
W
-
C
S
P
-----
Q
E
I
M
A
----
A
----
D
G
M--
P
-----
G
-
S
V
A
G
V
H
Y
R
A
N
V
Q
G
W
T
-
K
R
---
K
------
K
E
---
G
V
K
G
GK
A
V
E
Y
D
-
V
----
M
S
M
-------
P
T
K
E
R
E
Q
V
--
I
A
----
H
L
--
G
---
L
-------------
S
T
---------------------------------------------------------------------------------------------------------------------------------
11
Fugue
43.18
25%
33
* C6 *
-
3LD1
-
R1A_IBVM
A:
[5-363]
L
R
D
V
I
L
V
S
KDIP
E
Q
L
C
D
A
L
F
F
Y
TSHNPKD
Y
A
D
A
F
A
V
R
Q
K
F
D
R
N
L
Q
T
G
K
Q
F
K
F
ETVC
G
L
F
L
L
K
G
V
D
KITPGVP
A
K
V
L
K
ATSK
L
A
D
L
E
D
I
FGVS
P
F
A
R
K
Y
R
E
L
L
K
T
A
CQWSLT
V
E
T
L
D
A
R
A
L
T
LDEIFD
P
T
E
I
L
W
L
Q
V
AAK
I
Q
V
S
A
M
A
M
R
R
L
V
G
E
V
T
A
K
V
M
D
A
L
GSNMSALFQIFKQQI
V
R
I
F
Q
A
A
L
AIFENVSE
L
P
Q
R
I
A
A
L
K
M
A
F
A
K
C
AK
S
I
T
V
V
V
M
ERTLVVREFAGTCLA
S
I
N
G
A
V
A
K
F
F
E
E
L
P
N
G
F
MG
A
K
I
F
T
T
F
A
F
F
R
E
A
A
V
K
I
V
D
N
------------
I
P
-
N
A
P
R
--
G
T
K
G
F
E
-----
V
----
V
G
---
N
-----
A
-
K
------------
G
-------
T
------
Q
V
---
V
V
R
G
---
M
R
N
D
-
L
----
T
L
L
-------
D
Q
K
-------
A
E
----
I
P
--
V
---
E
-------------
S
E
G
W
S
A
I
L
G
G
H
L
C
Y
V
F
K
S
GD
R
F
Y
A
A
P
L
S
GNFALHD
V
H
C
C
E
R
V
VCL--------------------------------------------------------------------------------------
15
Fugue
41.20
19%
-53
- C4 -
0.18
5LW8
-
A:
[1-92]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNE
F
L
M
K
I
Q
T
A
I
S
S
K
N
------------
R
Y
-
P
K
M
A
--
Q
I
R
G
I
E
-----------
G
---
E
-----
V
-
L
------------
V
S
-
F
T
---
I
N
ADGS-
V
T
---
D
I
K
V
---
V
K
S
N
-
T
----
T
D
I
-------
L
N
H
A
A
L
E
A
--
I
K
----
S
A
--
A
---
H
L
F
P
K
P
EET
V
H
L
K
I
P
I
A
--
Y
S
L
K
E
D
------------------------------------------------------------------------------------------------------------------------
10
Fugue
39.47
14%
-
- C5 -
-
4U3Q
-
TA17_TREPA
A:
[10-130]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------K
A
K
A
E
K
V
E
C
A
L
KG
G
I
F
R
G
T
L
P
I
D
T
T
V
T
F
N
A
D
------------
G
T
-
A
Q
K
V
--
E
L
S
P
L
T
-----
Y
----
R
G
---
T
-----
W
-
M
------------
V
R
-
E
D
---
G
------
I
V
---
E
L
S
L
---
V
E
K
E
-
L
----
Y
E
L
-------
I
D
S
N
S
V
R
Y
--
M
G
----
A
P
GA
E
---
M
-------------
A
P
F
--
Y
V
L
K
K
T
------------------------------------------------------------------------------------------------------------------------
4
Fugue
38.65
10%
-13
- C4 -
0.20
2KHX
-
RNC_HUMAN
A:
[1259-1337]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NDPK
S
Q
L
Q
Q
C
C
L
T
L
R
T
E
G
------------
K
E
-
P
D
I
P
--
L
Y
K
T
L
Q
-----
T
----
V
G
---
P
-----
S
H
A
------------
R
T
-
Y
T
---
V
------
A
V
---
Y
F
K
G
---
E
R
I
G
-
C
----
G
K
G
-------
P
S
I
Q
Q
A
E
M
--
G
A
----
A
M
--
D
---
A
-------------
L
E
K
--
Y
N
F
P
Q
M
------------------------------------------------------------------------------------------------------------------------
27
HHSearch
38.39
27%
-94
- C4 -
0.17
3ZQS
2
FANCL_HUMAN
B:
[126-160]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
S
I
N
I
E
V
-------------
D
P
-
R
H
P
T
--
M
L
P
E
C
F
-----
F
----
L
G
---
A
-----
D
-
H
VV----------
K
P
-
L
G
---
I
------
K
L
---
S
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------